| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g23912 | 5:14,401,529-14,402,191 | - | - | CX5g036764 | LOC_Os05g30740 | Os05g0370300 | - | Detail |
| C1H5g17728 | 5:14,411,337-14,413,661 | + | C2H5g17041 | CX5g038684 | LOC_Os05g30750 | Os05g0370600 | OsFTIP7 | Detail |
| C1H5g12675 | 5:14,415,413-14,430,905 | - | C2H5g03177 | CX5g041132 | LOC_Os05g30760 | Os05g0370700 | - | Detail |
| C1H5g03586 | 5:14,437,894-14,439,007 | - | C2H5g03159 | CX5g041132 | LOC_Os05g30770 | Os05g0370700 | - | Detail |
| C1H5g09157 | 5:14,439,992-14,442,361 | - | C2H5g18725 | - | - | - | - | Detail |
| C1H5g17943 | 5:14,447,899-14,448,669 | - | C2H5g08422 | CX5g041132 | LOC_Os05g30780 | Os05g0370900 | - | Detail |
| C1H5g21956 | 5:14,462,259-14,469,208 | - | C2H5g06016 | CX5g038634 | LOC_Os05g30790 | Os05g0371100 | - | Detail |
| C1H5g25954 | 5:14,474,692-14,478,201 | + | C2H5g01418 | CX5g038746 | LOC_Os05g30800 | Os05g0371200 | - | Detail |
| C1H5g21361 | 5:14,485,449-14,485,816 | - | C2H5g22690 | CX5g038069 | LOC_Os05g30810 | Os05g0371500 | - | Detail |
| C1H5g31073 | 5:14,488,632-14,492,087 | - | C2H5g24664 | CX5g041026 | LOC_Os05g30820 | Os05g0371600 | - | Detail |
| C1H5g03916 | 5:14,508,080-14,509,832 | - | C2H5g23518 | CX5g036992 | LOC_Os05g30860 | Os05g0372000 | - | Detail |
| C1H5g18573 | 5:14,512,981-14,520,411 | + | C2H5g25829 | CX5g036869 | LOC_Os05g30870 | Os05g0372100 | - | Detail |
| C1H5g00039 | 5:14,522,490-14,523,659 | - | - | CX5g037049 | LOC_Os05g30880 | Os05g0372200 | - | Detail |
| C1H5g04173 | 5:14,524,221-14,526,645 | - | - | - | - | Os05g0372350 | - | Detail |
| C1H5g31276 | 5:14,526,386-14,526,745 | + | C2H5g24917 | CX5g039921 | LOC_Os05g30890 | Os05g0372300 | - | Detail |
| C1H5g07742 | 5:14,528,544-14,531,918 | + | C2H5g21527 | CX5g039921 | LOC_Os05g30890 | Os05g0372300 | - | Detail |
| C1H5g25459 | 5:14,532,436-14,535,746 | - | C2H5g21609 | CX5g038143 | LOC_Os05g30900 | Os05g0372400 | - | Detail |
| C1H5g08976 | 5:14,536,084-14,538,778 | + | C2H11g12527 | CX5g039049 | - | Os03g0435550 | - | Detail |
| C1H5g25038 | 5:14,543,727-14,546,425 | + | C2H5g29105 | CX5g039619 | LOC_Os05g30920 | Os05g0372800 | - | Detail |
| C1H5g13697 | 5:14,554,333-14,556,274 | - | C2H5g08208 | CX5g040118 | LOC_Os05g30940 | Os05g0372900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g05837 | 1:34,814,284-34,817,813 | - | C1H1g03400 | CX1g004760 | LOC_Os01g67770 | Os01g0904700 | RR26, OsRR26, Rrb6, Orr6, OsRR16, OsRRB6 | Detail |
| C2H1g29165 | 1:34,830,200-34,832,407 | + | C1H1g01129 | CX1g000275 | LOC_Os01g67810 | Os01g0905200 | - | Detail |
| C2H1g16521 | 1:34,833,811-34,835,983 | + | C1H1g31042 | CX1g001652 | LOC_Os01g67820 | Os01g0905300 | - | Detail |
| C2H1g29056 | 1:34,837,704-34,841,038 | - | C1H1g11384 | CX1g000161 | LOC_Os01g67830 | Os01g0905400 | - | Detail |
| C2H1g13823 | 1:34,849,593-34,852,389 | + | C1H1g03018 | CX1g004783 | LOC_Os01g67850 | Os01g0905700 | - | Detail |
| C2H1g10330 | 1:34,853,768-34,856,107 | - | C1H1g11811 | CX1g001709 | LOC_Os01g67860 | Os01g0905800 | - | Detail |
| C2H1g06722 | 1:34,859,001-34,864,128 | - | C1H1g06073 | CX1g001709 | LOC_Os01g67870 | Os01g0906000 | - | Detail |
| C2H1g09299 | 1:34,868,161-34,877,076 | - | C1H1g19357 | CX1g002463 | LOC_Os01g67880 | Os01g0906200 | - | Detail |
| C2H1g18200 | 1:34,880,705-34,886,760 | - | C1H1g19297 | CX1g003860 | LOC_Os01g67920 | Os01g0906600 | - | Detail |
| C2H1g20697 | 1:34,889,896-34,890,684 | + | C1H1g12726 | CX1g003493 | LOC_Os01g67950 | Os01g0907200 | - | Detail |
| C2H1g10610 | 1:34,893,569-34,898,685 | + | C1H1g26541 | CX1g004144 | LOC_Os01g67960 | Os01g0907300 | - | Detail |
| C2H1g19705 | 1:34,899,270-34,906,295 | + | C1H1g18538 | CX1g000822 | LOC_Os01g67970 | Os01g0907400 | JMJ705 | Detail |
| C2H1g19503 | 1:34,924,288-34,927,881 | + | C1H1g08768 | CX1g000912 | LOC_Os01g68000 | Os01g0907900 | PLA2, pla2, pla2(pla2-1, pla2-2), plt2, LHD2 | Detail |
| C2H1g14371 | 1:34,938,471-34,941,205 | - | C1H1g13810 | CX1g000788 | LOC_Os01g68010 | Os01g0908100 | - | Detail |
| C2H1g27794 | 1:34,944,440-34,948,560 | + | C1H1g00934 | CX1g002877 | LOC_Os01g68020 | Os01g0908200 | OsBT | Detail |
| C2H1g06918 | 1:34,949,685-34,950,957 | - | C1H1g26380 | CX1g005492 | LOC_Os01g68030 | Os01g0908400 | - | Detail |
| C2H1g30537 | 1:34,952,240-34,955,472 | - | C1H1g26157 | CX1g002681 | LOC_Os01g68040 | Os01g0908500 | - | Detail |
| C2H1g27819 | 1:34,962,221-34,964,922 | + | C1H1g02663 | CX1g003019 | LOC_Os01g68050 | Os01g0908600 | OsProT1 | Detail |
| C2H1g20684 | 1:34,965,284-34,969,654 | - | C1H1g28238 | CX1g003471 | LOC_Os01g68060 | Os01g0908700 | - | Detail |
| C2H1g29519 | 1:34,987,052-34,990,279 | + | C1H1g09218 | CX1g001897 | LOC_Os01g68104 | Os01g0909100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |