| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g22158 | 5:13,986,681-13,989,787 | + | C2H5g23177 | CX5g038457 | LOC_Os05g30210 | Os05g0365200 | - | Detail |
| C1H5g22274 | 5:14,012,101-14,015,955 | - | C2H5g10476 | CX5g038613 | LOC_Os05g30220 | Os05g0365300 | - | Detail |
| C1H5g14452 | 5:14,029,052-14,033,599 | - | C2H5g18448 | CX5g038142 | LOC_Os05g30220 | Os05g0365300 | - | Detail |
| C1H5g23340 | 5:14,037,074-14,039,806 | + | C2H5g26348 | CX5g040490 | LOC_Os05g30240 | Os05g0365500 | - | Detail |
| C1H5g05965 | 5:14,045,098-14,048,958 | + | C2H5g06194 | - | LOC_Os05g30250 | Os05g0365600 | - | Detail |
| C1H5g07103 | 5:14,051,629-14,055,845 | + | C2H5g19932 | - | LOC_Os05g30250 | Os05g0366000 | - | Detail |
| C1H5g06032 | 5:14,063,627-14,064,868 | + | C2H5g06194 | - | LOC_Os05g30250 | Os05g0366000 | - | Detail |
| C1H5g22626 | 5:14,066,560-14,069,518 | + | C2H5g06194 | - | LOC_Os05g30300 | Os05g0366000 | - | Detail |
| C1H5g00288 | 5:14,072,103-14,073,005 | + | C2H5g06194 | - | LOC_Os05g30320 | Os05g0366200 | - | Detail |
| C1H5g03731 | 5:14,077,566-14,080,598 | + | C2H5g29713 | - | LOC_Os05g30340 | Os05g0366300 | - | Detail |
| C1H5g19288 | 5:14,082,121-14,083,217 | - | - | - | - | - | - | Detail |
| C1H5g23717 | 5:14,088,103-14,088,480 | - | C2H1g27901 | CX4g033665 | - | - | - | Detail |
| C1H5g27352 | 5:14,088,921-14,093,985 | + | C2H5g15031 | - | LOC_Os05g30350 | Os05g0366600 | - | Detail |
| C1H5g25544 | 5:14,097,558-14,111,983 | + | C2H5g04038 | CX3g031021 | LOC_Os05g30390 | Os05g0366600 | - | Detail |
| C1H5g23019 | 5:14,112,189-14,113,871 | - | C2H5g23686 | CX5g039866 | LOC_Os05g30400 | Os05g0366900 | - | Detail |
| C1H5g29124 | 5:14,124,638-14,126,516 | - | C2H5g07643 | CX5g037938 | LOC_Os05g30720 | - | - | Detail |
| C1H5g05278 | 5:14,162,290-14,162,622 | - | C2H4g17808 | CX5g040671 | LOC_Os05g30410 | Os05g0367000 | OsPHF5A2 | Detail |
| C1H5g31214 | 5:14,165,809-14,167,782 | - | C2H5g26184 | CX5g039377 | LOC_Os05g30420 | Os05g0367100 | - | Detail |
| C1H5g00883 | 5:14,170,038-14,173,101 | - | C2H5g02529 | CX5g039616 | LOC_Os05g30430 | Os05g0367200 | - | Detail |
| C1H5g12306 | 5:14,176,946-14,180,279 | - | C2H5g17178 | CX5g039728 | LOC_Os05g30454 | Os05g0367400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g24975 | 11:16,692,608-16,692,960 | + | C1H11g19843 | - | LOC_Os11g31950 | - | - | Detail |
| C2H11g15275 | 11:16,697,652-16,705,175 | + | C1H11g09222 | CX11g013128 | LOC_Os11g31950 | Os11g0520500 | - | Detail |
| C2H11g24142 | 11:16,728,748-16,731,139 | + | C1H11g16863 | CX11g013484 | LOC_Os11g28910 | Os11g0577650 | - | Detail |
| C2H11g19045 | 11:16,732,007-16,733,082 | + | C1H11g31698 | CX11g013484 | - | Os11g0427500 | - | Detail |
| C2H11g16263 | 11:16,756,806-16,760,564 | + | C1H11g11772 | CX11g012283 | LOC_Os11g31980 | Os11g0522900 | - | Detail |
| C2H11g12649 | 11:16,778,751-16,781,348 | + | C1H11g11218 | CX11g014627 | LOC_Os11g32030 | Os11g0523110 | - | Detail |
| C2H11g09717 | 11:16,817,086-16,820,200 | + | C1H11g00427 | CX11g013633 | LOC_Os11g32100 | Os11g0523700 | OsbHLH002, OsICE1, OsbHLH002/OsICE1 | Detail |
| C2H11g09614 | 11:16,830,634-16,836,885 | - | C1H11g17844 | CX11g014158 | LOC_Os11g32110 | Os11g0523800 | OsARF1 | Detail |
| C2H11g10817 | 11:16,863,484-16,869,594 | + | C1H11g13491 | CX11g013407 | LOC_Os11g32160 | Os11g0524300 | - | Detail |
| C2H11g21371 | 11:16,871,234-16,874,265 | - | C1H11g14327 | CX11g014646 | LOC_Os11g32170 | Os11g0524900 | - | Detail |
| C2H11g28280 | 11:16,874,697-16,879,291 | - | C1H11g14327 | CX11g014646 | LOC_Os11g32210 | Os11g0588600 | - | Detail |
| C2H11g09530 | 11:16,880,611-16,881,012 | - | C1H11g17475 | - | - | Os11g0524601 | - | Detail |
| C2H11g10444 | 11:16,902,504-16,905,624 | - | C1H11g23665 | CX11g014944 | LOC_Os11g32210 | Os11g0524900 | - | Detail |
| C2H11g27202 | 11:16,905,657-16,909,055 | - | C1H11g14946 | CX11g014646 | LOC_Os11g32210 | Os11g0524900 | - | Detail |
| C2H11g23883 | 11:16,925,824-16,930,596 | + | C1H11g09838 | CX11g013119 | LOC_Os11g32240 | Os11g0525200 | - | Detail |
| C2H11g08336 | 11:16,937,086-16,946,252 | + | C1H11g05682 | CX11g011262 | LOC_Os11g32260 | Os11g0525600 | - | Detail |
| C2H11g25572 | 11:16,947,438-16,954,152 | + | C1H11g00418 | CX11g013339 | LOC_Os11g32270 | Os11g0525700 | - | Detail |
| C2H11g10749 | 11:16,955,024-16,957,443 | - | C1H11g06603 | CX11g012404 | LOC_Os11g32280 | Os11g0525800 | - | Detail |
| C2H11g13674 | 11:16,972,524-16,973,471 | - | C1H11g20221 | CX11g014447 | LOC_Os11g32290 | Os11g0525900 | - | Detail |
| C2H11g01012 | 11:16,981,776-16,983,942 | + | C1H11g11158 | CX11g013878 | LOC_Os11g32320 | Os11g0526200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |