| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08811 | 1:22,727,992-22,729,387 | + | C2H1g24347 | CX1g000338 | LOC_Os01g44090 | Os01g0631500 | - | Detail |
| C1H1g07009 | 1:22,749,888-22,754,361 | + | C2H1g14152 | CX1g001009 | LOC_Os01g44110 | Os01g0631700 | - | Detail |
| C1H1g05320 | 1:22,758,481-22,764,326 | + | C2H1g16370 | CX1g000935 | LOC_Os01g44130 | Os01g0631900 | - | Detail |
| C1H1g12869 | 1:22,778,149-22,779,192 | + | C2H1g06740 | - | - | - | - | Detail |
| C1H1g13707 | 1:22,789,394-22,789,909 | - | C2H1g03548 | - | LOC_Os01g44210 | Os01g0633000 | - | Detail |
| C1H1g09519 | 1:22,799,911-22,808,100 | + | C2H1g23506 | CX1g000578 | LOC_Os01g44220 | Os01g0633100 | AGPL2, OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2 | Detail |
| C1H1g25629 | 1:22,809,738-22,813,559 | + | C2H1g25610 | CX1g004196 | LOC_Os01g44230 | Os01g0633200 | - | Detail |
| C1H1g17417 | 1:22,815,019-22,817,459 | + | C2H1g21259 | CX1g001984 | LOC_Os01g44250 | Os01g0633400 | - | Detail |
| C1H1g26792 | 1:22,822,413-22,824,342 | + | C2H1g13154 | CX1g005798 | LOC_Os01g44260 | Os01g0633500 | Rd, DFR | Detail |
| C1H1g26567 | 1:22,827,646-22,835,145 | - | C2H1g30459 | CX1g002472 | LOC_Os01g44310 | Os01g0634300 | - | Detail |
| C1H1g01839 | 1:22,861,358-22,863,345 | - | C2H1g20909 | CX1g002072 | LOC_Os01g44330 | Os01g0634500 | - | Detail |
| C1H1g04340 | 1:22,864,879-22,866,443 | - | C2H1g10174 | CX1g000429 | LOC_Os01g44340 | Os01g0634600 | - | Detail |
| C1H1g02990 | 1:22,868,213-22,870,234 | + | C2H1g02801 | CX1g003750 | LOC_Os01g44360 | Os01g0634900 | - | Detail |
| C1H1g03527 | 1:22,887,199-22,890,609 | + | C2H1g14029 | CX1g001073 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C1H1g07657 | 1:22,892,905-22,894,371 | + | C2H1g03825 | CX8g052292 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C1H1g22176 | 1:22,898,659-22,904,337 | - | C2H1g05065 | CX1g000646 | LOC_Os01g44430 | Os01g0635600 | - | Detail |
| C1H1g27414 | 1:22,918,386-22,920,878 | - | C2H1g18946 | CX1g003935 | LOC_Os01g44960 | Os01g0636400 | - | Detail |
| C1H1g00331 | 1:22,930,406-22,934,280 | + | C2H1g07403 | CX1g001605 | LOC_Os01g44970 | Os01g0636500 | - | Detail |
| C1H1g13180 | 1:22,936,336-22,939,660 | - | C2H1g22263 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C1H1g21245 | 1:22,943,227-22,944,039 | + | C2H1g15078 | CX1g000311 | LOC_Os01g45090 | Os01g0637800 | OsMYB305 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g13167 | 12:21,086,841-21,089,177 | - | C1H12g22366 | CX12g018400 | LOC_Os12g41060 | Os12g0603300 | - | Detail |
| C2H12g21970 | 12:21,120,405-21,120,995 | - | C1H12g13373 | CX12g018464 | LOC_Os12g40750 | Os12g0599700 | OsPMEI48 | Detail |
| C2H12g28497 | 12:21,121,965-21,122,585 | + | C1H12g08928 | CX12g016404 | LOC_Os12g40760 | Os12g0599800 | OsPMEI49 | Detail |
| C2H12g00278 | 12:21,124,635-21,128,531 | + | C1H12g23472 | CX12g017819 | LOC_Os12g40780 | Os12g0600100 | - | Detail |
| C2H12g15411 | 12:21,130,167-21,135,704 | - | C1H12g12922 | CX12g018398 | LOC_Os12g40790 | Os12g0600200 | - | Detail |
| C2H12g11665 | 12:21,135,451-21,136,109 | + | - | - | - | Os12g0600301 | - | Detail |
| C2H12g19714 | 12:21,141,767-21,147,235 | + | C1H12g28921 | CX12g015295 | LOC_Os12g40830 | Os12g0600400 | - | Detail |
| C2H12g04014 | 12:21,150,446-21,152,449 | - | C1H12g21968 | CX12g017260 | LOC_Os12g40840 | Os12g0600701 | - | Detail |
| C2H12g27950 | 12:21,164,582-21,165,091 | + | C1H12g06068 | CX12g016048 | LOC_Os12g40860 | Os12g0601000 | - | Detail |
| C2H12g27835 | 12:21,165,324-21,170,400 | + | C1H12g04428 | CX12g016048 | LOC_Os12g40860 | Os12g0601000 | - | Detail |
| C2H12g07987 | 12:21,172,350-21,176,552 | + | C1H12g27980 | CX12g017141 | LOC_Os12g40880 | Os12g0601200 | - | Detail |
| C2H12g01054 | 12:21,177,895-21,183,532 | - | C1H12g31153 | CX12g017622 | LOC_Os12g40890 | Os12g0601300 | qPH12, OsIAA30 | Detail |
| C2H12g19413 | 12:21,193,281-21,194,261 | + | C1H12g26488 | CX12g017101 | LOC_Os12g40900 | Os12g0601400 | - | Detail |
| C2H12g14261 | 12:21,196,798-21,199,726 | + | - | CX12g017115 | - | - | - | Detail |
| C2H12g00551 | 12:21,202,138-21,202,401 | - | - | CX12g016994 | - | Os12g0601500 | - | Detail |
| C2H12g16643 | 12:21,204,275-21,209,132 | + | C1H12g12999 | CX12g015317 | LOC_Os12g40920 | Os12g0601800 | - | Detail |
| C2H12g04785 | 12:21,243,634-21,246,428 | - | C1H12g23558 | CX12g018160 | - | - | - | Detail |
| C2H12g01516 | 12:21,262,513-21,263,106 | - | C1H12g15394 | CX12g015758 | LOC_Os12g41040 | Os12g0603100 | SKL4-1 | Detail |
| C2H12g13838 | 12:21,264,097-21,264,321 | - | C1H12g02645 | CX12g017545 | - | - | - | Detail |
| C2H12g15774 | 12:21,298,047-21,298,829 | - | C1H12g02524 | CX12g018770 | LOC_Os12g41030 | Os12g0602966 | SKL2-1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |