| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08811 | 1:22,727,992-22,729,387 | + | C2H1g24347 | CX1g000338 | LOC_Os01g44090 | Os01g0631500 | - | Detail |
| C1H1g07009 | 1:22,749,888-22,754,361 | + | C2H1g14152 | CX1g001009 | LOC_Os01g44110 | Os01g0631700 | - | Detail |
| C1H1g05320 | 1:22,758,481-22,764,326 | + | C2H1g16370 | CX1g000935 | LOC_Os01g44130 | Os01g0631900 | - | Detail |
| C1H1g12869 | 1:22,778,149-22,779,192 | + | C2H1g06740 | - | - | - | - | Detail |
| C1H1g13707 | 1:22,789,394-22,789,909 | - | C2H1g03548 | - | LOC_Os01g44210 | Os01g0633000 | - | Detail |
| C1H1g09519 | 1:22,799,911-22,808,100 | + | C2H1g23506 | CX1g000578 | LOC_Os01g44220 | Os01g0633100 | AGPL2, OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2 | Detail |
| C1H1g25629 | 1:22,809,738-22,813,559 | + | C2H1g25610 | CX1g004196 | LOC_Os01g44230 | Os01g0633200 | - | Detail |
| C1H1g17417 | 1:22,815,019-22,817,459 | + | C2H1g21259 | CX1g001984 | LOC_Os01g44250 | Os01g0633400 | - | Detail |
| C1H1g26792 | 1:22,822,413-22,824,342 | + | C2H1g13154 | CX1g005798 | LOC_Os01g44260 | Os01g0633500 | Rd, DFR | Detail |
| C1H1g26567 | 1:22,827,646-22,835,145 | - | C2H1g30459 | CX1g002472 | LOC_Os01g44310 | Os01g0634300 | - | Detail |
| C1H1g01839 | 1:22,861,358-22,863,345 | - | C2H1g20909 | CX1g002072 | LOC_Os01g44330 | Os01g0634500 | - | Detail |
| C1H1g04340 | 1:22,864,879-22,866,443 | - | C2H1g10174 | CX1g000429 | LOC_Os01g44340 | Os01g0634600 | - | Detail |
| C1H1g02990 | 1:22,868,213-22,870,234 | + | C2H1g02801 | CX1g003750 | LOC_Os01g44360 | Os01g0634900 | - | Detail |
| C1H1g03527 | 1:22,887,199-22,890,609 | + | C2H1g14029 | CX1g001073 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C1H1g07657 | 1:22,892,905-22,894,371 | + | C2H1g03825 | CX8g052292 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C1H1g22176 | 1:22,898,659-22,904,337 | - | C2H1g05065 | CX1g000646 | LOC_Os01g44430 | Os01g0635600 | - | Detail |
| C1H1g27414 | 1:22,918,386-22,920,878 | - | C2H1g18946 | CX1g003935 | LOC_Os01g44960 | Os01g0636400 | - | Detail |
| C1H1g00331 | 1:22,930,406-22,934,280 | + | C2H1g07403 | CX1g001605 | LOC_Os01g44970 | Os01g0636500 | - | Detail |
| C1H1g13180 | 1:22,936,336-22,939,660 | - | C2H1g22263 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C1H1g21245 | 1:22,943,227-22,944,039 | + | C2H1g15078 | CX1g000311 | LOC_Os01g45090 | Os01g0637800 | OsMYB305 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g05703 | 12:6,400,727-6,401,789 | - | C1H12g22587 | - | - | - | - | Detail |
| C2H12g12555 | 12:6,457,237-6,462,149 | - | C1H12g22302 | CX12g016768 | LOC_Os12g13824 | Os12g0241100 | - | Detail |
| C2H12g06713 | 12:6,499,949-6,500,728 | - | C1H12g10883 | CX12g017347 | LOC_Os12g13890 | Os12g0242100 | - | Detail |
| C2H12g28896 | 12:6,503,706-6,504,529 | - | C1H12g02106 | CX12g016285 | LOC_Os12g13900 | Os12g0242200 | - | Detail |
| C2H12g16020 | 12:6,514,616-6,515,617 | + | C1H12g14554 | CX12g016093 | LOC_Os12g13910 | Os12g0242500 | - | Detail |
| C2H12g27977 | 12:6,531,379-6,534,216 | + | C1H12g01819 | CX12g015195 | LOC_Os12g13930 | Os12g0242700 | - | Detail |
| C2H12g19112 | 12:6,537,674-6,542,360 | - | C1H12g02837 | CX12g016080 | LOC_Os12g13950 | Os12g0242900 | - | Detail |
| C2H12g01967 | 12:6,561,043-6,566,822 | + | C1H12g26088 | CX12g017625 | LOC_Os12g14070 | Os12g0244100 | - | Detail |
| C2H12g23058 | 12:6,572,636-6,574,721 | + | C1H12g02592 | CX12g016741 | LOC_Os12g14100 | Os12g0244400 | OsLHT2 | Detail |
| C2H12g05045 | 12:6,576,468-6,579,787 | - | C1H12g04304 | CX12g016624 | LOC_Os12g14110 | Os12g0244500 | - | Detail |
| C2H12g00893 | 12:6,611,281-6,612,851 | + | C1H12g15817 | CX12g016736 | LOC_Os12g14150 | Os12g0245100 | - | Detail |
| C2H12g21920 | 12:6,696,476-6,699,378 | + | C1H12g07600 | CX12g016189 | LOC_Os12g14330 | Os12g0246700 | - | Detail |
| C2H12g11124 | 12:6,730,957-6,732,712 | + | C1H12g09846 | CX12g018035 | LOC_Os12g14440 | Os12g0247700 | OsJAC1 | Detail |
| C2H12g08802 | 12:6,755,182-6,771,105 | - | C1H12g18946 | CX12g017919 | LOC_Os12g14520 | Os12g0249900 | - | Detail |
| C2H12g11757 | 12:6,786,239-6,786,547 | + | C1H12g14954 | CX12g016028 | LOC_Os12g14540 | Os12g0248600 | - | Detail |
| C2H12g14675 | 12:6,899,242-6,917,594 | - | C1H12g01574 | CX12g016969 | LOC_Os12g15190 | Os12g0255200 | - | Detail |
| C2H12g11814 | 12:6,938,543-6,938,996 | + | C1H12g10971 | - | - | - | - | Detail |
| C2H12g23111 | 12:6,939,395-6,939,982 | + | C1H12g21150 | CX12g016059 | LOC_Os12g14580 | Os12g0249100 | OsTET15 | Detail |
| C2H12g11642 | 12:6,985,744-6,996,802 | - | C1H12g18946 | CX12g018022 | LOC_Os12g14520 | Os12g0249900 | - | Detail |
| C2H12g18623 | 12:7,018,726-7,019,869 | - | C1H12g22496 | CX12g018714 | - | Os12g0250900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |