| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08811 | 1:22,727,992-22,729,387 | + | C2H1g24347 | CX1g000338 | LOC_Os01g44090 | Os01g0631500 | - | Detail |
| C1H1g07009 | 1:22,749,888-22,754,361 | + | C2H1g14152 | CX1g001009 | LOC_Os01g44110 | Os01g0631700 | - | Detail |
| C1H1g05320 | 1:22,758,481-22,764,326 | + | C2H1g16370 | CX1g000935 | LOC_Os01g44130 | Os01g0631900 | - | Detail |
| C1H1g12869 | 1:22,778,149-22,779,192 | + | C2H1g06740 | - | - | - | - | Detail |
| C1H1g13707 | 1:22,789,394-22,789,909 | - | C2H1g03548 | - | LOC_Os01g44210 | Os01g0633000 | - | Detail |
| C1H1g09519 | 1:22,799,911-22,808,100 | + | C2H1g23506 | CX1g000578 | LOC_Os01g44220 | Os01g0633100 | AGPL2, OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2 | Detail |
| C1H1g25629 | 1:22,809,738-22,813,559 | + | C2H1g25610 | CX1g004196 | LOC_Os01g44230 | Os01g0633200 | - | Detail |
| C1H1g17417 | 1:22,815,019-22,817,459 | + | C2H1g21259 | CX1g001984 | LOC_Os01g44250 | Os01g0633400 | - | Detail |
| C1H1g26792 | 1:22,822,413-22,824,342 | + | C2H1g13154 | CX1g005798 | LOC_Os01g44260 | Os01g0633500 | Rd, DFR | Detail |
| C1H1g26567 | 1:22,827,646-22,835,145 | - | C2H1g30459 | CX1g002472 | LOC_Os01g44310 | Os01g0634300 | - | Detail |
| C1H1g01839 | 1:22,861,358-22,863,345 | - | C2H1g20909 | CX1g002072 | LOC_Os01g44330 | Os01g0634500 | - | Detail |
| C1H1g04340 | 1:22,864,879-22,866,443 | - | C2H1g10174 | CX1g000429 | LOC_Os01g44340 | Os01g0634600 | - | Detail |
| C1H1g02990 | 1:22,868,213-22,870,234 | + | C2H1g02801 | CX1g003750 | LOC_Os01g44360 | Os01g0634900 | - | Detail |
| C1H1g03527 | 1:22,887,199-22,890,609 | + | C2H1g14029 | CX1g001073 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C1H1g07657 | 1:22,892,905-22,894,371 | + | C2H1g03825 | CX8g052292 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C1H1g22176 | 1:22,898,659-22,904,337 | - | C2H1g05065 | CX1g000646 | LOC_Os01g44430 | Os01g0635600 | - | Detail |
| C1H1g27414 | 1:22,918,386-22,920,878 | - | C2H1g18946 | CX1g003935 | LOC_Os01g44960 | Os01g0636400 | - | Detail |
| C1H1g00331 | 1:22,930,406-22,934,280 | + | C2H1g07403 | CX1g001605 | LOC_Os01g44970 | Os01g0636500 | - | Detail |
| C1H1g13180 | 1:22,936,336-22,939,660 | - | C2H1g22263 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C1H1g21245 | 1:22,943,227-22,944,039 | + | C2H1g15078 | CX1g000311 | LOC_Os01g45090 | Os01g0637800 | OsMYB305 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01891 | 1:28,804,103-28,805,391 | - | C1H1g00876 | CX1g003833 | LOC_Os01g56070 | Os01g0766200 | - | Detail |
| C2H1g17996 | 1:28,807,817-28,808,548 | + | C1H1g18862 | CX1g000494 | LOC_Os12g07170 | Os01g0872900 | - | Detail |
| C2H1g14203 | 1:28,810,030-28,811,934 | - | C1H1g13664 | CX1g004570 | LOC_Os12g12690 | Os01g0527900 | - | Detail |
| C2H1g09451 | 1:28,823,578-28,824,686 | + | C1H1g10462 | CX1g000212 | LOC_Os01g56090 | Os01g0766400 | - | Detail |
| C2H1g11262 | 1:28,829,620-28,833,903 | + | C1H1g05983 | CX1g004309 | LOC_Os01g56100 | Os01g0766600 | - | Detail |
| C2H1g27726 | 1:28,853,152-28,856,797 | - | C1H1g11621 | CX1g002848 | LOC_Os01g56130 | Os01g0766900 | OsCSLC1 | Detail |
| C2H1g25186 | 1:28,862,323-28,867,547 | - | C1H1g23773 | CX1g006079 | LOC_Os01g56140 | Os01g0767000 | OsNMCP1 | Detail |
| C2H1g12650 | 1:28,869,195-28,872,753 | - | C1H1g07882 | CX1g002490 | LOC_Os01g56150 | Os01g0767100 | - | Detail |
| C2H1g17994 | 1:28,879,596-28,882,208 | + | C1H1g20009 | CX1g005086 | LOC_Os01g56180 | Os01g0767600 | - | Detail |
| C2H1g02356 | 1:28,882,754-28,892,859 | + | C1H1g00590 | CX1g007067 | LOC_Os01g56190 | Os01g0767700 | - | Detail |
| C2H1g28755 | 1:28,899,247-28,902,370 | + | C1H1g02614 | CX1g005068 | LOC_Os01g56200 | Os01g0767900 | - | Detail |
| C2H1g28135 | 1:28,903,763-28,904,524 | - | C1H1g10000 | CX1g005201 | LOC_Os01g56220 | Os01g0768100 | - | Detail |
| C2H1g25364 | 1:28,905,795-28,906,043 | + | - | - | - | - | - | Detail |
| C2H1g22289 | 1:28,906,228-28,906,515 | + | C1H1g16919 | CX1g002369 | - | - | - | Detail |
| C2H1g30374 | 1:28,907,288-28,910,805 | - | C1H1g17993 | CX1g001137 | LOC_Os01g56230 | Os01g0768200 | - | Detail |
| C2H1g26550 | 1:28,913,363-28,915,373 | - | C1H1g11693 | CX1g002315 | LOC_Os01g56235 | Os01g0768300 | - | Detail |
| C2H1g30140 | 1:28,917,092-28,917,463 | + | C1H1g01409 | CX1g002605 | LOC_Os01g56240 | Os01g0768333 | OsSAUR2 | Detail |
| C2H1g24802 | 1:28,929,582-28,935,150 | + | C1H1g26530 | CX1g000267 | LOC_Os01g56290 | Os01g0768700 | - | Detail |
| C2H1g13364 | 1:28,936,882-28,943,015 | + | C1H1g09383 | CX1g006707 | LOC_Os01g43980 | - | - | Detail |
| C2H1g11170 | 1:28,949,464-28,956,140 | + | C1H1g30094 | CX1g001998 | LOC_Os01g56300 | Os01g0769000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |