| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g25908 | 5:13,757,972-13,758,595 | + | C2H5g04934 | CX5g041138 | LOC_Os05g29740 | Os05g0360900 | OsPMEI23 | Detail |
| C1H5g22546 | 5:13,760,833-13,762,580 | + | C2H5g01492 | CX5g040449 | LOC_Os05g29750 | Os05g0361000 | - | Detail |
| C1H5g08636 | 5:13,773,788-13,780,852 | + | C2H5g13846 | CX5g038793 | LOC_Os05g29760 | Os05g0361200 | - | Detail |
| C1H5g03254 | 5:13,793,958-13,797,428 | + | C2H5g25357 | CX5g040980 | LOC_Os05g29790 | Os05g0361500 | - | Detail |
| C1H5g12777 | 5:13,807,016-13,807,833 | + | C2H5g09274 | CX5g038564 | LOC_Os05g29810 | Os05g0361700 | - | Detail |
| C1H5g03219 | 5:13,823,973-13,827,962 | - | C2H5g20265 | CX5g039336 | LOC_Os05g29860 | Os05g0361900 | - | Detail |
| C1H5g04926 | 5:13,839,456-13,846,778 | + | C2H5g22364 | CX5g041061 | LOC_Os05g29880 | Os05g0362100 | - | Detail |
| C1H5g27955 | 5:13,860,355-13,860,879 | + | C2H5g20791 | CX5g039354 | LOC_Os05g29900 | Os05g0362300 | - | Detail |
| C1H5g20956 | 5:13,866,854-13,867,399 | + | C2H5g20791 | CX5g039061 | LOC_Os05g29920 | Os05g0362500 | - | Detail |
| C1H5g07799 | 5:13,869,212-13,869,985 | - | C2H5g18229 | CX5g039620 | LOC_Os05g29930 | Os05g0362600 | - | Detail |
| C1H5g17400 | 5:13,882,049-13,882,531 | + | C2H5g03181 | CX5g038225 | - | Os05g0120000 | - | Detail |
| C1H5g12419 | 5:13,886,678-13,888,228 | + | C2H5g11320 | CX5g039330 | LOC_Os05g29974 | Os05g0363100 | - | Detail |
| C1H5g29412 | 5:13,891,243-13,893,088 | + | C2H5g08574 | CX5g039330 | LOC_Os05g29974 | Os05g0363100 | - | Detail |
| C1H5g15955 | 5:13,893,174-13,897,330 | - | C2H5g00252 | CX5g040639 | LOC_Os05g29990 | Os05g0363200 | OsUXS5 | Detail |
| C1H5g25034 | 5:13,912,669-13,920,066 | - | C2H5g08499 | CX5g040379 | LOC_Os05g30010 | Os05g0363500 | - | Detail |
| C1H5g26689 | 5:13,933,778-13,934,176 | - | C2H5g14151 | CX5g038648 | LOC_Os05g30030 | Os05g0363600 | - | Detail |
| C1H5g31895 | 5:13,951,468-13,954,464 | - | C2H5g11223 | CX5g038831 | LOC_Os05g30130 | Os05g0364500 | - | Detail |
| C1H5g05062 | 5:13,955,162-13,961,322 | + | C2H5g10985 | CX5g039200 | LOC_Os05g30140 | Os05g0364600 | OsSR34 | Detail |
| C1H5g13319 | 5:13,963,781-13,965,110 | - | C2H5g24216 | CX5g040302 | LOC_Os05g30160 | - | - | Detail |
| C1H5g14982 | 5:13,975,896-13,976,999 | + | - | - | LOC_Os05g30190 | Os05g0365000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24840 | 2:1,459,227-1,460,306 | - | C1H2g22701 | CX2g023931 | LOC_Os02g03810 | Os02g0130800 | - | Detail |
| C2H2g02495 | 2:1,460,596-1,464,462 | + | C1H2g15224 | CX2g024589 | LOC_Os02g03820 | Os02g0130900 | - | Detail |
| C2H2g19848 | 2:1,474,131-1,487,088 | + | C1H2g22468 | CX2g021664 | LOC_Os02g03840 | Os02g0131100 | - | Detail |
| C2H2g29791 | 2:1,489,744-1,494,355 | - | C1H2g15765 | CX2g022294 | LOC_Os02g03850 | Os02g0131200 | - | Detail |
| C2H2g01875 | 2:1,494,950-1,498,086 | + | C1H2g24459 | CX2g022118 | LOC_Os02g03860 | Os02g0131300 | - | Detail |
| C2H2g19732 | 2:1,501,219-1,507,407 | - | C1H2g13894 | CX2g019313 | LOC_Os02g03870 | Os02g0131400 | - | Detail |
| C2H2g21277 | 2:1,515,090-1,518,459 | - | C1H2g05041 | CX2g020563 | LOC_Os02g03890 | Os02g0131700 | - | Detail |
| C2H2g13835 | 2:1,522,048-1,525,853 | - | C1H2g18848 | CX2g019095 | LOC_Os02g03900 | Os02g0131800 | NRAMP4, OsNRAMP4, Nrat1, Nramp6, OsNRAT1 | Detail |
| C2H2g22540 | 2:1,530,555-1,535,423 | - | C1H2g00924 | CX2g019802 | LOC_Os02g03930 | Os02g0132100 | - | Detail |
| C2H2g12575 | 2:1,535,853-1,539,352 | - | C1H2g01456 | CX2g018957 | LOC_Os02g03940 | Os02g0132200 | - | Detail |
| C2H2g02428 | 2:1,543,985-1,546,846 | + | C1H2g17223 | CX2g021626 | LOC_Os02g03950 | Os02g0132300 | - | Detail |
| C2H2g10653 | 2:1,558,042-1,558,651 | - | C1H2g04467 | CX2g021994 | LOC_Os02g03960 | Os02g0132500 | OsbZIP14 | Detail |
| C2H2g24972 | 2:1,571,267-1,580,224 | - | C1H2g04799 | CX2g024093 | LOC_Os02g03970 | Os02g0132600 | - | Detail |
| C2H2g13962 | 2:1,595,705-1,597,622 | - | C1H2g29927 | CX2g021970 | LOC_Os02g03990 | - | - | Detail |
| C2H2g06861 | 2:1,598,314-1,598,631 | - | C1H2g29927 | CX2g021970 | LOC_Os02g03990 | - | - | Detail |
| C2H2g19617 | 2:1,602,687-1,606,437 | - | C1H2g20335 | CX2g022112 | LOC_Os02g04010 | Os02g0133000 | - | Detail |
| C2H2g07026 | 2:1,612,616-1,621,430 | + | C1H2g27472 | CX2g024675 | LOC_Os02g04020 | Os02g0133100 | OsSec14-5 | Detail |
| C2H2g19093 | 2:1,622,017-1,623,109 | - | C1H2g25242 | CX2g019449 | LOC_Os02g04030 | Os02g0133200 | OsSec14-6 | Detail |
| C2H2g19264 | 2:1,623,332-1,626,294 | - | C1H2g25242 | CX2g019449 | LOC_Os02g04030 | Os02g0133200 | OsSec14-6 | Detail |
| C2H2g26953 | 2:1,627,447-1,650,977 | - | C1H2g18206 | CX2g024350 | LOC_Os02g04080 | Os02g0133300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |