| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g11363 | 5:13,536,349-13,536,843 | - | - | CX5g040069 | LOC_Os05g28840 | Os05g0356800 | - | Detail |
| C1H5g31648 | 5:13,543,810-13,550,269 | + | C2H5g24764 | CX5g040608 | LOC_Os05g28860 | Os05g0357100 | - | Detail |
| C1H5g23359 | 5:13,553,750-13,557,697 | + | C2H5g24182 | CX5g039247 | LOC_Os05g28870 | Os05g0357200 | - | Detail |
| C1H5g03054 | 5:13,571,163-13,571,549 | + | C2H5g04780 | - | LOC_Os05g28930 | Os05g0357500 | - | Detail |
| C1H5g02870 | 5:13,573,608-13,575,941 | + | C2H5g05040 | CX5g039137 | LOC_Os05g28930 | Os05g0409500 | - | Detail |
| C1H5g10874 | 5:13,580,070-13,586,789 | + | C2H5g26423 | CX5g039940 | LOC_Os05g28940 | Os05g0357600 | - | Detail |
| C1H5g28225 | 5:13,587,611-13,590,802 | + | C2H5g16492 | CX5g039406 | LOC_Os05g28950 | Os05g0357700 | - | Detail |
| C1H5g03244 | 5:13,592,665-13,597,057 | - | C2H5g23485 | CX5g039295 | LOC_Os05g28960 | Os05g0357800 | - | Detail |
| C1H5g07764 | 5:13,600,404-13,605,579 | - | C2H5g02423 | CX5g040983 | LOC_Os05g28980 | Os05g0562200 | - | Detail |
| C1H5g03245 | 5:13,609,620-13,610,135 | - | C2H5g03271 | CX5g039973 | LOC_Os05g29000 | Os05g0576600 | - | Detail |
| C1H5g06850 | 5:13,616,500-13,621,541 | - | C2H5g18517 | CX5g039449 | LOC_Os05g29010 | Os05g0358200 | - | Detail |
| C1H5g03489 | 5:13,623,433-13,626,094 | + | C2H5g01658 | - | - | - | - | Detail |
| C1H5g29355 | 5:13,627,872-13,630,636 | + | C2H5g18308 | CX5g040880 | LOC_Os05g29020 | Os05g0358400 | - | Detail |
| C1H5g26207 | 5:13,630,855-13,635,294 | - | C2H5g24350 | CX5g038320 | LOC_Os05g29030 | Os05g0358500 | - | Detail |
| C1H5g07959 | 5:13,669,561-13,680,280 | - | C2H5g09784 | CX5g036891 | LOC_Os05g29050 | Os05g0358700 | - | Detail |
| C1H5g11715 | 5:13,699,696-13,700,385 | - | C2H5g26181 | CX5g039572 | LOC_Os05g29080 | Os05g0358900 | - | Detail |
| C1H5g02402 | 5:13,702,561-13,706,818 | - | C2H5g26282 | - | LOC_Os05g29090 | Os05g0359000 | - | Detail |
| C1H5g30237 | 5:13,717,135-13,717,824 | + | C2H5g10119 | CX5g036901 | LOC_Os05g29150 | Os05g0359500 | - | Detail |
| C1H5g17878 | 5:13,732,235-13,732,843 | + | C2H5g10119 | CX5g037230 | LOC_Os05g29676 | Os05g0360400 | - | Detail |
| C1H5g28482 | 5:13,745,587-13,746,180 | + | C2H5g10119 | CX5g038039 | LOC_Os05g29710 | Os05g0360400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05108 | 3:4,707,270-4,710,116 | + | C1H3g14289 | CX3g026129 | LOC_Os03g10440 | Os03g0201500 | OsMORE1a | Detail |
| C2H3g04674 | 3:4,711,100-4,713,323 | - | C1H3g07517 | CX3g029780 | LOC_Os03g10450 | Os03g0201600 | - | Detail |
| C2H3g27684 | 3:4,714,151-4,716,867 | + | C1H3g08866 | CX3g025008 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| C2H3g15317 | 3:4,716,730-4,720,061 | - | C1H3g26823 | CX3g027908 | LOC_Os03g10469 | Os03g0201800 | - | Detail |
| C2H3g07444 | 3:4,720,624-4,725,054 | - | C1H3g22443 | CX3g027908 | LOC_Os03g10478 | Os03g0201901 | - | Detail |
| C2H3g09161 | 3:4,730,604-4,734,181 | - | C1H3g14443 | CX3g028036 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| C2H3g24025 | 3:4,736,414-4,740,022 | - | C1H3g22113 | CX3g026152 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| C2H3g13194 | 3:4,741,051-4,745,017 | - | C1H3g27837 | CX3g030169 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| C2H3g17561 | 3:4,746,437-4,749,472 | - | C1H3g27666 | CX3g025689 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| C2H3g21513 | 3:4,752,859-4,759,444 | + | C1H3g27625 | CX3g029844 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| C2H3g08169 | 3:4,771,694-4,772,873 | + | C1H3g03653 | CX3g027943 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| C2H3g27974 | 3:4,783,031-4,789,961 | + | C1H3g22146 | CX3g027605 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| C2H3g08201 | 3:4,792,026-4,793,503 | - | C1H3g29891 | CX3g028482 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| C2H3g30001 | 3:4,812,950-4,817,305 | + | C1H3g06442 | CX3g026677 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| C2H3g23547 | 3:4,820,796-4,821,985 | + | C1H3g30369 | CX3g029117 | LOC_Os03g10730 | - | - | Detail |
| C2H3g15767 | 3:4,829,271-4,829,690 | - | C1H3g08546 | - | LOC_Os03g10710 | Os03g0204500 | - | Detail |
| C2H3g08384 | 3:4,832,991-4,834,679 | + | C1H3g00980 | CX3g029117 | LOC_Os03g10730 | - | - | Detail |
| C2H3g07827 | 3:4,838,784-4,841,678 | + | C1H3g16112 | CX3g030767 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| C2H3g15453 | 3:4,842,534-4,842,952 | - | C1H3g05329 | - | LOC_Os03g10740 | Os03g0204900 | - | Detail |
| C2H3g17885 | 3:4,844,672-4,850,468 | - | C1H3g13244 | CX3g028803 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |