| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g08501 | 5:13,091,501-13,092,025 | + | C2H5g20870 | CX5g038186 | LOC_Os05g27780 | Os05g0344200 | - | Detail |
| C1H5g01346 | 5:13,104,959-13,107,752 | - | C2H5g20264 | CX5g038759 | LOC_Os05g27749 | Os05g0343800 | - | Detail |
| C1H5g27385 | 5:13,117,535-13,118,678 | - | C2H5g04895 | CX5g038298 | LOC_Os05g28150 | Os05g0574000 | - | Detail |
| C1H5g10495 | 5:13,124,228-13,124,955 | - | C2H5g24296 | - | LOC_Os05g28170 | Os05g0349000 | - | Detail |
| C1H5g28470 | 5:13,125,004-13,125,391 | - | C2H5g01277 | - | - | - | - | Detail |
| C1H5g17654 | 5:13,129,514-13,140,472 | - | C2H5g21735 | CX5g038977 | LOC_Os05g28180 | Os05g0349200 | - | Detail |
| C1H5g06860 | 5:13,154,074-13,154,778 | + | C2H5g17650 | CX5g037238 | - | Os05g0349400 | - | Detail |
| C1H5g27836 | 5:13,155,919-13,157,340 | - | C2H5g21599 | CX5g037323 | LOC_Os05g28190 | Os05g0349500 | - | Detail |
| C1H5g13828 | 5:13,162,845-13,168,627 | + | C2H5g06848 | CX5g039025 | LOC_Os05g28200 | Os05g0349700 | - | Detail |
| C1H5g05895 | 5:13,169,734-13,170,127 | - | C2H5g23580 | CX5g036783 | LOC_Os05g28210 | Os05g0349800 | - | Detail |
| C1H5g13261 | 5:13,172,837-13,173,611 | - | C2H5g02639 | - | - | - | - | Detail |
| C1H5g14457 | 5:13,192,670-13,196,676 | + | C2H5g29583 | CX5g039857 | LOC_Os05g28280 | Os05g0350500 | - | Detail |
| C1H5g17562 | 5:13,200,849-13,203,424 | + | C2H5g21599 | CX5g039007 | LOC_Os05g28290 | Os05g0350600 | - | Detail |
| C1H5g16123 | 5:13,206,195-13,217,685 | + | C2H5g07484 | CX5g037642 | LOC_Os05g28300 | Os05g0350700 | - | Detail |
| C1H5g17008 | 5:13,222,024-13,222,950 | - | C2H5g28285 | CX5g040736 | LOC_Os05g28320 | Os05g0350900 | Os2R_MYB54 | Detail |
| C1H5g12930 | 5:13,237,625-13,238,428 | - | C2H5g09274 | CX5g038612 | LOC_Os05g28350 | Os05g0351200 | - | Detail |
| C1H5g29097 | 5:13,259,584-13,262,512 | - | C2H5g17200 | CX5g038755 | LOC_Os05g28370 | Os05g0351500 | - | Detail |
| C1H5g24445 | 5:13,285,991-13,290,668 | + | C2H5g14159 | CX5g039488 | LOC_Os05g28460 | Os05g0352700 | - | Detail |
| C1H5g20523 | 5:13,295,782-13,297,507 | + | C2H5g18746 | CX5g039121 | - | - | - | Detail |
| C1H5g18199 | 5:13,302,108-13,306,187 | + | C2H5g08977 | CX5g038297 | LOC_Os05g28470 | Os05g0352750 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g00265 | 11:16,017,977-16,018,242 | + | C1H11g04694 | - | - | - | - | Detail |
| C2H11g03682 | 11:16,019,282-16,020,371 | + | C1H11g22326 | CX11g013108 | LOC_Os11g30910 | Os11g0505300 | STV11, OsSOT1 | Detail |
| C2H11g12950 | 11:16,055,498-16,056,635 | - | C1H11g18981 | CX11g012904 | - | - | - | Detail |
| C2H11g07707 | 11:16,058,802-16,062,787 | - | C1H11g04733 | CX11g013034 | LOC_Os11g31070 | Os11g0506300 | - | Detail |
| C2H11g24452 | 11:16,083,324-16,085,813 | - | C1H11g01433 | CX11g011882 | - | - | - | Detail |
| C2H11g19133 | 11:16,101,966-16,104,538 | + | C1H11g28049 | CX11g014596 | LOC_Os11g31090 | Os11g0507200 | - | Detail |
| C2H11g00051 | 11:16,106,403-16,112,480 | - | C1H11g02002 | CX11g011414 | LOC_Os11g31100 | Os11g0507300 | - | Detail |
| C2H11g25408 | 11:16,116,383-16,122,093 | - | C1H11g16532 | CX11g014983 | LOC_Os11g31110 | Os11g0507400 | - | Detail |
| C2H11g13604 | 11:16,175,027-16,183,838 | + | C1H11g15164 | CX11g012879 | - | - | - | Detail |
| C2H11g14886 | 11:16,212,809-16,215,231 | - | C1H11g17370 | CX11g014845 | LOC_Os11g31190 | Os11g0508600 | 11N3, OsSWEET14, Os11N3, Os-11N3, Xa41(t) | Detail |
| C2H11g10237 | 11:16,225,735-16,229,982 | - | C1H11g16566 | - | - | - | - | Detail |
| C2H11g01178 | 11:16,265,929-16,267,830 | + | C1H11g06724 | CX11g013912 | LOC_Os11g31330 | Os11g0512000 | ONAC025, SS1, SS1/ ONAC025 | Detail |
| C2H11g11640 | 11:16,271,802-16,273,910 | + | C1H11g14895 | CX11g013912 | LOC_Os11g31340 | Os11g0512100 | ONAC127 | Detail |
| C2H11g24382 | 11:16,278,637-16,280,896 | + | C1H11g00143 | CX11g012563 | LOC_Os11g31360 | Os11g0512200 | - | Detail |
| C2H11g26741 | 11:16,289,112-16,291,043 | + | C1H11g30952 | CX11g012563 | LOC_Os11g31380 | Os11g0512600 | ONAC129 | Detail |
| C2H11g02622 | 11:16,298,647-16,298,982 | + | C1H11g16256 | CX11g011889 | LOC_Os11g31400 | Os11g0512800 | - | Detail |
| C2H11g28267 | 11:16,341,430-16,350,415 | - | C1H11g13788 | - | LOC_Os11g31480 | Os11g0514000 | stvb-j, Stvb-i, ST07i | Detail |
| C2H11g17850 | 11:16,353,764-16,355,586 | - | C1H11g31406 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| C2H11g12230 | 11:16,373,799-16,375,853 | - | C1H11g25036 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| C2H11g06164 | 11:16,376,216-16,378,142 | - | C1H11g25036 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |