| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g21673 | 5:12,160,661-12,162,144 | + | - | CX5g041147 | LOC_Os05g25900 | Os05g0324300 | - | Detail |
| C1H5g16305 | 5:12,191,388-12,194,312 | - | C2H5g27623 | - | - | - | - | Detail |
| C1H5g03907 | 5:12,209,900-12,210,524 | - | C2H5g20667 | - | LOC_Os05g26032 | - | - | Detail |
| C1H5g23263 | 5:12,211,865-12,214,104 | - | C2H5g11949 | - | - | Os05g0326625 | - | Detail |
| C1H5g15988 | 5:12,223,905-12,226,312 | + | C2H5g16502 | - | LOC_Os05g26040 | Os05g0326675 | - | Detail |
| C1H5g09881 | 5:12,243,689-12,244,417 | - | C2H5g20286 | CX5g039730 | LOC_Os05g25950 | Os05g0325200 | - | Detail |
| C1H5g16539 | 5:12,260,148-12,265,747 | + | C2H5g00505 | CX5g040571 | LOC_Os05g26040 | Os05g0327100 | - | Detail |
| C1H5g28898 | 5:12,306,874-12,307,587 | + | - | CX5g039166 | LOC_Os05g26210 | Os05g0328300 | - | Detail |
| C1H5g27660 | 5:12,310,267-12,311,592 | + | - | - | - | - | - | Detail |
| C1H5g17672 | 5:12,337,503-12,337,955 | + | C2H5g20535 | CX5g036904 | LOC_Os05g26620 | Os05g0328901 | - | Detail |
| C1H5g18321 | 5:12,349,801-12,350,253 | + | C2H5g20535 | CX5g036904 | LOC_Os05g26620 | Os05g0330600 | - | Detail |
| C1H5g12231 | 5:12,371,769-12,372,605 | - | - | CX5g040367 | - | Os05g0330700 | - | Detail |
| C1H5g26352 | 5:12,376,695-12,382,195 | - | C2H5g11759 | CX5g041064 | LOC_Os05g26660 | Os05g0331200 | OsNDB2 | Detail |
| C1H5g29790 | 5:12,398,349-12,398,810 | - | C2H5g20535 | CX5g040593 | LOC_Os05g26620 | Os05g0328632 | - | Detail |
| C1H5g05804 | 5:12,406,378-12,406,839 | - | C2H5g20535 | CX5g040593 | LOC_Os05g26620 | Os05g0328632 | - | Detail |
| C1H5g09865 | 5:12,425,391-12,427,865 | - | C2H5g05869 | CX5g038066 | LOC_Os05g26810 | Os05g0332250 | - | Detail |
| C1H5g14769 | 5:12,429,744-12,434,142 | + | C2H5g22325 | - | - | - | - | Detail |
| C1H5g16392 | 5:12,452,405-12,454,096 | - | - | CX5g038516 | LOC_Os05g26840 | Os05g0332600 | - | Detail |
| C1H5g17024 | 5:12,474,293-12,474,595 | - | C2H5g25274 | - | - | Os05g0333600 | - | Detail |
| C1H5g25969 | 5:12,478,356-12,479,288 | - | - | CX5g039489 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22497 | 4:608,553-609,763 | + | C1H4g22895 | CX4g034880 | LOC_Os04g01930 | Os04g0109900 | - | Detail |
| C2H4g13476 | 4:661,919-668,448 | + | C1H4g18566 | CX4g032566 | LOC_Os04g01970 | Os04g0110300 | - | Detail |
| C2H4g23508 | 4:670,151-672,685 | + | C1H4g12929 | CX4g034294 | LOC_Os04g01980 | Os04g0110400 | - | Detail |
| C2H4g21870 | 4:677,322-682,276 | - | C1H4g14298 | CX4g032574 | LOC_Os04g02000 | Os04g0110600 | OsSTL1 | Detail |
| C2H4g18873 | 4:687,564-689,253 | - | C1H4g28215 | CX4g031548 | - | - | - | Detail |
| C2H4g25092 | 4:709,146-710,670 | + | C1H4g05772 | CX4g035956 | LOC_Os04g02030 | Os04g0111100 | - | Detail |
| C2H4g22392 | 4:713,746-718,166 | - | C1H4g05772 | CX4g035956 | LOC_Os04g02030 | Os04g0111100 | - | Detail |
| C2H4g08632 | 4:721,545-723,301 | + | C1H4g20764 | CX4g036450 | LOC_Os09g25740 | Os04g0536300 | YAB5, OsYABBY5, OsYAB3, YAB3, Os YABBY5, TOB1 | Detail |
| C2H4g19107 | 4:723,807-727,848 | - | C1H4g08342 | CX4g034175 | LOC_Os04g02050 | Os04g0111200 | - | Detail |
| C2H4g16798 | 4:733,199-737,429 | - | C1H4g15454 | CX4g031586 | LOC_Os04g02140 | Os04g0112200 | OsE2Fc | Detail |
| C2H4g05319 | 4:740,677-747,238 | - | C1H4g00631 | CX4g033275 | LOC_Os04g02150 | Os04g0112300 | - | Detail |
| C2H4g29574 | 4:754,582-757,461 | + | C1H4g07839 | CX4g032358 | LOC_Os04g02500 | Os04g0115400 | - | Detail |
| C2H4g06234 | 4:762,329-765,855 | + | C1H4g24213 | CX4g032534 | LOC_Os04g02510 | Os04g0115500 | OsTIF1 | Detail |
| C2H4g07573 | 4:772,840-778,752 | - | C1H4g16974 | CX4g032131 | LOC_Os04g02550 | Os04g0115650 | - | Detail |
| C2H4g18135 | 4:791,005-792,634 | - | C1H4g16974 | CX4g032921 | LOC_Os04g02520 | Os04g0115650 | - | Detail |
| C2H4g05459 | 4:800,687-804,647 | - | C1H2g20339 | CX4g035069 | LOC_Os02g22580 | Os10g0388600 | - | Detail |
| C2H4g11156 | 4:812,094-816,431 | - | C1H4g10301 | CX4g034543 | LOC_Os07g15160 | Os04g0357300 | - | Detail |
| C2H4g01183 | 4:817,308-821,222 | - | - | CX4g034543 | - | - | - | Detail |
| C2H4g17583 | 4:823,317-823,728 | + | - | - | - | - | - | Detail |
| C2H4g14840 | 4:826,123-833,410 | - | C1H4g26900 | CX4g036593 | LOC_Os04g02550 | Os04g0115650 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |