| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g00809 | 5:11,982,210-11,984,061 | - | C2H5g18962 | CX5g037533 | LOC_Os05g25560 | Os05g0319900 | - | Detail |
| C1H5g07771 | 5:12,001,890-12,004,026 | + | C2H5g16379 | CX5g040926 | LOC_Os05g25600 | Os05g0320300 | - | Detail |
| C1H5g18434 | 5:12,005,370-12,006,031 | + | C2H5g17208 | CX5g040614 | LOC_Os05g25620 | Os05g0320500 | - | Detail |
| C1H5g11691 | 5:12,012,645-12,014,131 | - | C2H5g12884 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C1H5g29408 | 5:12,015,766-12,016,554 | - | C2H5g12884 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C1H5g31853 | 5:12,053,670-12,054,445 | + | C2H5g23272 | CX5g039065 | - | Os05g0321900 | - | Detail |
| C1H5g21190 | 5:12,055,039-12,058,391 | + | C2H5g30247 | CX5g039065 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| C1H5g09562 | 5:12,072,384-12,073,544 | + | C2H5g20457 | CX5g039731 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| C1H5g20684 | 5:12,079,618-12,082,497 | + | C2H5g00966 | CX5g037483 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| C1H5g15138 | 5:12,088,755-12,088,970 | - | C2H5g12832 | CX5g037550 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| C1H5g03510 | 5:12,094,616-12,098,484 | + | C2H5g27944 | - | - | - | - | Detail |
| C1H5g02171 | 5:12,094,751-12,098,348 | - | C2H5g23193 | CX5g037938 | - | Os05g0475600 | - | Detail |
| C1H5g07569 | 5:12,110,411-12,114,059 | + | C2H5g25840 | CX5g038231 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| C1H5g09336 | 5:12,115,350-12,119,558 | + | C2H5g02562 | CX5g039355 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| C1H5g18365 | 5:12,121,188-12,122,633 | + | C2H5g29319 | CX5g038450 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C1H5g16408 | 5:12,140,296-12,142,180 | + | C2H5g21674 | CX5g037596 | LOC_Os05g25170 | - | - | Detail |
| C1H5g24963 | 5:12,142,187-12,144,548 | + | C2H5g11879 | CX12g015435 | LOC_Os05g25170 | - | - | Detail |
| C1H5g19700 | 5:12,146,724-12,149,612 | + | C2H5g22294 | CX5g038330 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C1H5g26142 | 5:12,149,959-12,153,426 | - | C2H5g05113 | CX5g040251 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| C1H5g26115 | 5:12,158,868-12,160,517 | + | C2H5g07422 | CX5g041147 | LOC_Os05g25890 | Os05g0324300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g30050 | 2:1,055,202-1,059,110 | - | C1H2g20249 | CX2g023862 | LOC_Os02g03000 | Os02g0122400 | - | Detail |
| C2H2g00030 | 2:1,061,277-1,062,235 | - | C1H2g29748 | CX2g021302 | LOC_Os02g03010 | Os02g0122500 | - | Detail |
| C2H2g06370 | 2:1,068,224-1,069,001 | + | C1H2g08277 | CX2g023212 | LOC_Os02g03030 | Os02g0122700 | - | Detail |
| C2H2g10904 | 2:1,069,074-1,070,529 | + | C1H2g08277 | CX2g023212 | LOC_Os02g03030 | Os02g0122700 | - | Detail |
| C2H2g28700 | 2:1,070,595-1,073,010 | - | C1H2g27601 | - | - | - | - | Detail |
| C2H2g25159 | 2:1,075,699-1,080,410 | - | C1H2g31820 | CX2g022379 | LOC_Os02g03050 | Os02g0122900 | - | Detail |
| C2H2g22931 | 2:1,089,026-1,092,305 | + | C1H2g03945 | CX2g024568 | LOC_Os02g03060 | Os02g0123100 | - | Detail |
| C2H2g13660 | 2:1,098,389-1,102,394 | + | C1H2g02277 | CX2g020485 | LOC_Os02g03070 | Os02g0123200 | - | Detail |
| C2H2g26852 | 2:1,103,044-1,107,394 | + | C1H2g29552 | CX2g021929 | LOC_Os07g03230 | Os02g0123300 | - | Detail |
| C2H2g03733 | 2:1,108,358-1,111,614 | - | C1H2g13634 | CX2g022135 | LOC_Os02g03090 | Os02g0123400 | - | Detail |
| C2H2g29106 | 2:1,112,905-1,115,825 | - | C1H2g20581 | CX2g024876 | LOC_Os02g03100 | Os02g0123500 | - | Detail |
| C2H2g28501 | 2:1,116,858-1,119,142 | - | C1H2g30926 | CX2g019388 | LOC_Os02g03110 | Os02g0123600 | - | Detail |
| C2H2g11986 | 2:1,122,853-1,125,738 | + | C1H2g17340 | CX2g022038 | LOC_Os02g03120 | Os02g0123700 | - | Detail |
| C2H2g11894 | 2:1,139,314-1,141,707 | - | C1H2g24129 | CX2g024660 | LOC_Os02g03200 | Os02g0124400 | - | Detail |
| C2H2g10657 | 2:1,144,713-1,146,975 | - | C1H2g18770 | CX2g022297 | LOC_Os02g03210 | Os02g0124599 | - | Detail |
| C2H2g03146 | 2:1,147,985-1,159,329 | + | C1H2g11067 | CX2g019968 | LOC_Os02g03220 | Os02g0124700 | - | Detail |
| C2H2g27899 | 2:1,160,057-1,163,545 | - | C1H2g20968 | CX2g019168 | LOC_Os02g03230 | Os02g0124800 | - | Detail |
| C2H2g08179 | 2:1,167,690-1,169,162 | + | C1H2g18725 | CX2g018850 | LOC_Os02g03250 | Os02g0125000 | - | Detail |
| C2H2g23066 | 2:1,170,561-1,175,557 | - | C1H2g28809 | CX2g021703 | LOC_Os02g03260 | Os02g0125100 | - | Detail |
| C2H2g03711 | 2:1,181,951-1,186,356 | + | C1H2g17626 | CX2g021121 | LOC_Os02g03270 | Os02g0125200 | OsAHL1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |