| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g00809 | 5:11,982,210-11,984,061 | - | C2H5g18962 | CX5g037533 | LOC_Os05g25560 | Os05g0319900 | - | Detail |
| C1H5g07771 | 5:12,001,890-12,004,026 | + | C2H5g16379 | CX5g040926 | LOC_Os05g25600 | Os05g0320300 | - | Detail |
| C1H5g18434 | 5:12,005,370-12,006,031 | + | C2H5g17208 | CX5g040614 | LOC_Os05g25620 | Os05g0320500 | - | Detail |
| C1H5g11691 | 5:12,012,645-12,014,131 | - | C2H5g12884 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C1H5g29408 | 5:12,015,766-12,016,554 | - | C2H5g12884 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C1H5g31853 | 5:12,053,670-12,054,445 | + | C2H5g23272 | CX5g039065 | - | Os05g0321900 | - | Detail |
| C1H5g21190 | 5:12,055,039-12,058,391 | + | C2H5g30247 | CX5g039065 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| C1H5g09562 | 5:12,072,384-12,073,544 | + | C2H5g20457 | CX5g039731 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| C1H5g20684 | 5:12,079,618-12,082,497 | + | C2H5g00966 | CX5g037483 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| C1H5g15138 | 5:12,088,755-12,088,970 | - | C2H5g12832 | CX5g037550 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| C1H5g03510 | 5:12,094,616-12,098,484 | + | C2H5g27944 | - | - | - | - | Detail |
| C1H5g02171 | 5:12,094,751-12,098,348 | - | C2H5g23193 | CX5g037938 | - | Os05g0475600 | - | Detail |
| C1H5g07569 | 5:12,110,411-12,114,059 | + | C2H5g25840 | CX5g038231 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| C1H5g09336 | 5:12,115,350-12,119,558 | + | C2H5g02562 | CX5g039355 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| C1H5g18365 | 5:12,121,188-12,122,633 | + | C2H5g29319 | CX5g038450 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C1H5g16408 | 5:12,140,296-12,142,180 | + | C2H5g21674 | CX5g037596 | LOC_Os05g25170 | - | - | Detail |
| C1H5g24963 | 5:12,142,187-12,144,548 | + | C2H5g11879 | CX12g015435 | LOC_Os05g25170 | - | - | Detail |
| C1H5g19700 | 5:12,146,724-12,149,612 | + | C2H5g22294 | CX5g038330 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C1H5g26142 | 5:12,149,959-12,153,426 | - | C2H5g05113 | CX5g040251 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| C1H5g26115 | 5:12,158,868-12,160,517 | + | C2H5g07422 | CX5g041147 | LOC_Os05g25890 | Os05g0324300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g07760 | 8:17,993,343-17,993,783 | - | C1H8g16742 | - | LOC_Os08g33680 | Os08g0433600 | - | Detail |
| C2H8g19157 | 8:18,003,184-18,004,989 | + | C1H8g03052 | CX8g053071 | LOC_Os08g33700 | Os08g0434000 | - | Detail |
| C2H8g08761 | 8:18,010,516-18,012,235 | + | C1H8g08573 | CX8g050799 | LOC_Os08g33710 | Os08g0434100 | - | Detail |
| C2H8g00945 | 8:18,013,354-18,013,707 | - | - | CX8g052453 | - | Os08g0434201 | - | Detail |
| C2H8g05662 | 8:18,014,537-18,017,469 | - | C1H8g29077 | CX8g054256 | LOC_Os08g33720 | Os08g0434300 | OsMDH8.1 | Detail |
| C2H8g09886 | 8:18,033,513-18,041,471 | + | C1H8g16683 | CX8g053048 | LOC_Os08g33740 | Os08g0434632 | OsCSLA11 | Detail |
| C2H8g04506 | 8:18,045,302-18,046,526 | - | C1H8g25425 | CX8g051117 | LOC_Os08g33750 | Os08g0434700 | - | Detail |
| C2H8g01695 | 8:18,093,921-18,096,195 | + | C1H8g20272 | CX8g053725 | LOC_Os08g33800 | Os08g0435725 | - | Detail |
| C2H8g21347 | 8:18,104,430-18,107,987 | - | C1H8g13702 | CX8g051983 | LOC_Os08g33810 | Os08g0435800 | OsLPLA | Detail |
| C2H8g15840 | 8:18,109,841-18,111,312 | - | C1H8g18889 | CX8g050811 | LOC_Os08g33820 | Os08g0435900 | - | Detail |
| C2H8g05435 | 8:18,112,374-18,117,603 | - | C1H8g27231 | CX8g051532 | LOC_Os08g33830 | Os08g0436000 | - | Detail |
| C2H8g23160 | 8:18,128,500-18,132,436 | + | C1H8g22122 | CX8g052417 | LOC_Os08g33850 | Os08g0436100 | OsAPY4 | Detail |
| C2H8g11991 | 8:18,135,395-18,137,965 | + | C1H8g20233 | CX8g053098 | LOC_Os08g33860 | Os08g0436200 | - | Detail |
| C2H8g23257 | 8:18,139,048-18,139,719 | + | C1H8g08213 | CX8g051799 | LOC_Os08g33880 | Os08g0436400 | - | Detail |
| C2H8g09390 | 8:18,141,112-18,141,516 | - | C1H8g29998 | CX8g050495 | LOC_Os08g33890 | Os08g0436500 | - | Detail |
| C2H8g06096 | 8:18,141,831-18,144,697 | + | C1H8g18303 | CX8g051817 | LOC_Os08g33900 | Os08g0436600 | - | Detail |
| C2H8g23745 | 8:18,150,005-18,151,597 | + | C1H8g14220 | CX8g051740 | LOC_Os08g33910 | Os08g0436700 | ONAC063 | Detail |
| C2H8g21917 | 8:18,152,958-18,154,512 | - | C1H8g02092 | CX8g051251 | LOC_Os08g33920 | Os08g0436800 | - | Detail |
| C2H8g28775 | 8:18,170,183-18,171,371 | + | C1H8g28955 | CX8g053580 | LOC_Os08g33940 | Os08g0437300 | Os2R_MYB78 | Detail |
| C2H8g26659 | 8:18,195,744-18,196,124 | + | C1H8g30791 | CX8g052157 | LOC_Os08g37400 | Os08g0438100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |