| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g01632 | 5:11,052,405-11,059,345 | - | C2H5g01064 | CX5g037017 | LOC_Os05g23924 | Os05g0304900 | - | Detail |
| C1H5g22159 | 5:11,092,617-11,101,298 | + | C2H5g30014 | CX5g038283 | LOC_Os05g23940 | Os05g0305100 | - | Detail |
| C1H5g18033 | 5:11,096,813-11,097,145 | - | - | - | - | Os05g0305150 | - | Detail |
| C1H5g00006 | 5:11,103,177-11,104,351 | + | C2H4g05575 | CX5g038919 | LOC_Os05g23950 | Os05g0305200 | - | Detail |
| C1H5g19296 | 5:11,111,425-11,123,681 | - | C2H5g08357 | CX5g040364 | LOC_Os05g23960 | Os05g0305300 | - | Detail |
| C1H5g16715 | 5:11,165,384-11,171,488 | - | C2H5g07432 | CX5g037290 | LOC_Os05g24000 | Os05g0305700 | - | Detail |
| C1H5g25266 | 5:11,185,297-11,191,137 | + | C2H5g21577 | CX5g040201 | LOC_Os05g24010 | Os05g0305900 | - | Detail |
| C1H5g23435 | 5:11,191,775-11,200,386 | - | C2H5g20371 | CX5g037665 | LOC_Os05g24020 | Os05g0306000 | - | Detail |
| C1H5g22935 | 5:11,234,340-11,243,823 | + | C2H5g05702 | CX5g037031 | LOC_Os05g24140 | Os05g0307100 | - | Detail |
| C1H5g07106 | 5:11,245,409-11,247,451 | - | C2H5g28956 | CX5g037443 | LOC_Os05g24150 | Os05g0307200 | - | Detail |
| C1H5g26016 | 5:11,266,439-11,272,657 | - | C2H5g01593 | CX5g040600 | LOC_Os05g24160 | Os05g0307400 | OsDRB1-1 | Detail |
| C1H5g02736 | 5:11,368,677-11,372,875 | + | C2H5g00614 | CX5g037332 | LOC_Os05g24550 | Os05g0310500 | - | Detail |
| C1H5g04494 | 5:11,373,364-11,375,193 | - | C2H5g17111 | CX5g037484 | LOC_Os05g24560 | Os05g0310600 | - | Detail |
| C1H5g26249 | 5:11,380,219-11,390,049 | + | C2H5g23044 | CX5g040547 | LOC_Os05g24580 | Os05g0310750 | - | Detail |
| C1H5g13473 | 5:11,392,994-11,397,834 | + | C2H5g15821 | CX5g037996 | LOC_Os05g24601 | Os05g0310800 | - | Detail |
| C1H5g24769 | 5:11,402,978-11,408,180 | + | C2H5g25624 | CX5g037996 | LOC_Os05g24601 | Os05g0311000 | - | Detail |
| C1H5g28483 | 5:11,437,171-11,437,934 | + | C2H5g00350 | CX5g037701 | LOC_Os05g24650 | Os05g0311500 | - | Detail |
| C1H5g19973 | 5:11,472,540-11,485,744 | - | C2H5g01545 | CX5g040887 | LOC_Os05g24684 | Os05g0312000 | SPL40 | Detail |
| C1H5g11619 | 5:11,513,946-11,516,487 | - | C2H5g12302 | CX5g037289 | LOC_Os05g24770 | Os05g0312500 | - | Detail |
| C1H5g25693 | 5:11,534,828-11,540,882 | + | C2H5g00579 | CX5g039271 | LOC_Os05g24880 | Os05g0313500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g22986 | 11:837,648-841,629 | - | C1H11g21830 | CX11g011406 | LOC_Os12g02710 | Os11g0120200 | - | Detail |
| C2H11g01727 | 11:856,189-858,539 | + | C1H11g06531 | CX11g013247 | LOC_Os12g02730 | Os11g0120600 | - | Detail |
| C2H11g19747 | 11:863,464-867,543 | + | C1H11g00074 | CX11g013247 | LOC_Os12g02730 | Os11g0120725 | - | Detail |
| C2H11g07452 | 11:867,074-868,939 | - | C1H11g19265 | CX11g013016 | LOC_Os12g02760 | Os11g0121000 | - | Detail |
| C2H11g27746 | 11:879,383-883,925 | - | C1H11g24980 | CX11g012023 | LOC_Os12g02810 | Os11g0121400 | - | Detail |
| C2H11g18565 | 11:896,828-899,519 | - | C1H12g01196 | CX11g012580 | LOC_Os12g02830 | Os11g0123500 | OsSNF7.3 | Detail |
| C2H11g14593 | 11:902,644-905,256 | + | C1H11g13638 | CX11g013051 | LOC_Os11g03070 | Os11g0123600 | - | Detail |
| C2H11g13616 | 11:925,994-928,866 | + | C1H11g05824 | CX11g012864 | LOC_Os11g03110 | Os11g0124300 | OsSCR1 | Detail |
| C2H11g12710 | 11:930,413-930,863 | + | C1H11g21592 | - | - | - | - | Detail |
| C2H11g27808 | 11:935,233-936,979 | + | C1H11g02113 | CX11g011459 | LOC_Os11g03130 | Os11g0124500 | - | Detail |
| C2H11g12455 | 11:947,380-948,702 | + | - | - | LOC_Os12g02890 | - | - | Detail |
| C2H11g30531 | 11:951,321-956,763 | - | C1H11g05866 | CX11g010987 | LOC_Os11g03160 | Os11g0124900 | - | Detail |
| C2H11g22399 | 11:963,864-966,263 | - | C1H11g27495 | CX11g011530 | LOC_Os11g03200 | Os11g0125500 | - | Detail |
| C2H11g17171 | 11:967,139-967,899 | + | C1H11g17257 | CX11g014122 | LOC_Os12g02960 | Os11g0125601 | - | Detail |
| C2H11g18559 | 11:968,375-970,888 | - | C1H11g02962 | CX11g012533 | LOC_Os11g03220 | Os11g0125700 | - | Detail |
| C2H11g08980 | 11:976,812-979,352 | + | C1H11g20891 | CX11g013454 | LOC_Os12g02980 | Os11g0125900 | - | Detail |
| C2H11g29415 | 11:983,955-987,083 | + | C1H11g29922 | CX11g013454 | LOC_Os11g03290 | Os11g0126400 | OsAPY6 | Detail |
| C2H11g14924 | 11:988,457-989,122 | + | C1H11g08382 | CX11g013454 | LOC_Os11g03270 | Os11g0125900 | - | Detail |
| C2H11g07686 | 11:991,696-995,655 | + | C1H11g26767 | CX11g014599 | LOC_Os11g03290 | Os11g0126800 | OsAPY7 | Detail |
| C2H11g20336 | 11:1,002,005-1,003,549 | + | C1H11g12971 | CX11g013912 | LOC_Os11g03300 | Os11g0126900 | NAC122, OsNAC10, ONAC122, NAC122 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |