| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10500 | 1:22,518,437-22,527,127 | + | C2H1g29248 | CX1g004459 | LOC_Os01g43630 | Os01g0626200 | - | Detail |
| C1H1g23387 | 1:22,528,112-22,528,354 | - | C2H1g04282 | CX1g003074 | - | Os01g0626300 | - | Detail |
| C1H1g04034 | 1:22,533,329-22,535,563 | + | C2H1g17198 | CX1g001615 | LOC_Os01g43650 | Os01g0626400 | WRKY11, OsWRKY11.2 | Detail |
| C1H1g18400 | 1:22,559,207-22,560,696 | + | C2H1g04147 | CX1g002724 | LOC_Os01g43700 | Os01g0627400 | - | Detail |
| C1H1g01575 | 1:22,561,176-22,562,074 | + | C2H1g04147 | CX1g003827 | LOC_Os01g43700 | Os01g0627400 | - | Detail |
| C1H1g28702 | 1:22,563,931-22,567,603 | - | C2H1g19850 | CX1g002724 | LOC_Os01g43710 | Os01g0627500 | - | Detail |
| C1H1g25990 | 1:22,574,890-22,575,992 | - | C2H1g29868 | CX1g006577 | LOC_Os01g43774 | Os01g0602200 | CYP72A31 | Detail |
| C1H1g03097 | 1:22,576,399-22,577,274 | - | C2H1g29868 | CX1g006577 | LOC_Os01g43720 | Os01g0627600 | - | Detail |
| C1H1g04951 | 1:22,580,563-22,583,125 | + | C2H1g22502 | CX1g003827 | LOC_Os01g43740 | Os01g0627800 | - | Detail |
| C1H1g09293 | 1:22,586,136-22,588,042 | + | C2H1g27924 | CX1g005051 | LOC_Os01g43750 | Os01g0627900 | - | Detail |
| C1H1g30037 | 1:22,590,557-22,591,439 | + | C2H1g27924 | CX1g006577 | LOC_Os01g43760 | Os01g0627933 | - | Detail |
| C1H1g21900 | 1:22,596,246-22,598,309 | + | C2H1g07157 | CX1g006577 | LOC_Os01g43774 | Os01g0628000 | - | Detail |
| C1H1g04171 | 1:22,612,169-22,613,533 | + | - | - | - | - | - | Detail |
| C1H1g21541 | 1:22,617,418-22,622,164 | + | C2H1g04659 | CX1g003827 | LOC_Os01g43844 | Os01g0628700 | - | Detail |
| C1H1g06376 | 1:22,623,681-22,625,714 | + | C2H1g09539 | CX1g003827 | LOC_Os01g43851 | Os01g0628900 | - | Detail |
| C1H1g08197 | 1:22,630,305-22,636,761 | + | C2H1g01356 | CX1g000972 | LOC_Os01g43870 | Os01g0629400 | - | Detail |
| C1H1g14568 | 1:22,646,983-22,653,155 | - | C2H1g07937 | CX1g006840 | LOC_Os01g43910 | Os01g0629900 | - | Detail |
| C1H1g00799 | 1:22,685,857-22,692,715 | + | C2H1g22336 | CX1g005258 | LOC_Os01g44040 | Os01g0631100 | - | Detail |
| C1H1g26941 | 1:22,693,595-22,696,640 | + | C2H1g25630 | CX1g002535 | LOC_Os01g44050 | Os01g0631200 | - | Detail |
| C1H1g05926 | 1:22,714,745-22,721,428 | + | C2H1g14517 | CX1g001624 | LOC_Os01g44069 | Os01g0631400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g10310 | 3:10,894,128-10,896,740 | + | C1H3g27306 | CX3g030007 | LOC_Os03g21450 | Os03g0130800 | - | Detail |
| C2H3g17481 | 3:10,896,805-10,900,686 | - | C1H3g15898 | CX3g028069 | LOC_Os03g21460 | Os03g0332400 | GLYII-2, OsGLYII2, GLYII2, OsGLYII-2 | Detail |
| C2H3g22879 | 3:10,904,923-10,906,403 | - | C1H3g21366 | CX3g029311 | LOC_Os11g11390 | Os03g0332500 | - | Detail |
| C2H3g01804 | 3:10,908,596-10,910,611 | - | C1H3g21148 | CX3g027147 | LOC_Os03g21480 | Os03g0332533 | - | Detail |
| C2H3g10583 | 3:10,913,454-10,917,924 | - | C1H3g11764 | CX3g025440 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| C2H3g24190 | 3:10,924,413-10,929,402 | + | C1H3g02450 | CX3g027316 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| C2H3g30311 | 3:10,929,734-10,935,090 | - | C1H3g13994 | CX3g028180 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| C2H3g26938 | 3:10,935,271-10,945,526 | + | C1H3g12459 | CX3g029941 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| C2H3g19269 | 3:10,946,787-10,949,471 | + | C1H3g29664 | CX3g028103 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| C2H3g24047 | 3:10,953,705-10,958,206 | + | C1H3g30788 | CX3g028855 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| C2H3g24886 | 3:10,958,751-10,959,254 | + | C1H3g06087 | CX3g028002 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| C2H3g01911 | 3:10,962,059-10,966,029 | - | C1H3g12764 | CX3g030167 | LOC_Os03g21620 | Os03g0333500 | - | Detail |
| C2H3g06072 | 3:10,971,787-10,975,855 | + | C1H3g24732 | CX3g030080 | LOC_Os03g21630 | Os03g0334100 | - | Detail |
| C2H3g19486 | 3:10,977,888-10,981,311 | + | C1H3g12242 | CX3g025988 | LOC_Os03g21640 | Os03g0334200 | - | Detail |
| C2H3g01471 | 3:10,981,968-10,982,447 | - | C1H3g12872 | CX3g025425 | LOC_Os03g21650 | Os03g0334300 | - | Detail |
| C2H3g23114 | 3:10,988,613-10,995,631 | + | C1H3g04089 | CX3g028192 | LOC_Os03g21680 | Os03g0334700 | - | Detail |
| C2H3g29675 | 3:10,995,715-11,000,869 | - | C1H3g19863 | CX3g026146 | LOC_Os03g21690 | Os03g0334800 | - | Detail |
| C2H3g22866 | 3:11,003,512-11,004,783 | + | C1H3g05344 | CX3g026406 | LOC_Os03g21700 | Os03g0335100 | - | Detail |
| C2H3g03886 | 3:11,009,746-11,011,541 | + | C1H3g04080 | CX3g025256 | LOC_Os03g21710 | Os03g0335200 | - | Detail |
| C2H3g08004 | 3:11,015,360-11,015,605 | + | C1H3g16339 | CX3g030092 | - | Os07g0676800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |