| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06318 | 5:10,047,389-10,058,387 | - | C2H5g10745 | CX5g038011 | LOC_Os05g22370 | Os05g0290300 | - | Detail |
| C1H5g18692 | 5:10,058,048-10,059,676 | + | C2H5g10916 | CX5g040377 | - | Os05g0290400 | - | Detail |
| C1H5g23196 | 5:10,228,107-10,234,632 | - | C2H5g04743 | CX5g038307 | LOC_Os05g22614 | Os05g0291700 | - | Detail |
| C1H5g20156 | 5:10,260,443-10,266,834 | + | C2H5g12203 | CX5g040197 | LOC_Os05g22670 | Os05g0292200 | - | Detail |
| C1H5g10205 | 5:10,285,227-10,285,822 | + | C2H5g15751 | CX5g040839 | LOC_Os05g22730 | Os05g0292800 | OsOHP1 | Detail |
| C1H5g15221 | 5:10,352,875-10,354,383 | - | C2H5g13624 | CX5g036919 | LOC_Os05g22800 | Os05g0293500 | OsPLL5 | Detail |
| C1H5g29337 | 5:10,395,664-10,398,699 | - | C2H5g22285 | CX5g040512 | LOC_Os05g22870 | Os05g0294600 | - | Detail |
| C1H5g25906 | 5:10,436,845-10,454,603 | + | C2H5g17701 | CX5g039739 | LOC_Os05g22920 | Os05g0295100 | - | Detail |
| C1H5g15505 | 5:10,475,980-10,480,296 | - | C2H7g11674 | - | - | - | - | Detail |
| C1H5g28245 | 5:10,485,584-10,488,684 | - | C2H5g06215 | CX5g039891 | LOC_Os05g22930 | Os05g0295200 | - | Detail |
| C1H5g21771 | 5:10,492,395-10,504,764 | - | C2H5g06622 | CX5g039924 | LOC_Os05g22940 | Os05g0295300 | OsACC1 | Detail |
| C1H5g26458 | 5:10,506,099-10,506,365 | - | - | CX5g039924 | LOC_Os05g22940 | - | - | Detail |
| C1H5g15592 | 5:10,524,206-10,524,610 | - | C2H5g00536 | - | LOC_Os05g22960 | Os05g0295700 | - | Detail |
| C1H5g21493 | 5:10,526,219-10,530,456 | - | C2H5g11939 | CX5g040395 | LOC_Os05g22970 | Os05g0295800 | GLYI8, OsGLYI8, OsGLYI-8 | Detail |
| C1H5g00566 | 5:10,542,245-10,552,118 | - | C2H5g18701 | CX5g039339 | LOC_Os05g22990 | Os05g0295900 | - | Detail |
| C1H5g19321 | 5:10,567,664-10,568,722 | - | C2H5g07041 | CX5g037329 | LOC_Os05g23140 | - | - | Detail |
| C1H5g27869 | 5:10,583,215-10,583,634 | + | C2H5g24059 | CX5g040816 | - | Os05g0297300 | - | Detail |
| C1H5g31671 | 5:10,585,051-10,589,455 | + | C2H5g08500 | CX5g040816 | LOC_Os05g23230 | Os05g0297300 | - | Detail |
| C1H5g08736 | 5:10,605,861-10,609,063 | + | C2H5g30540 | CX5g040339 | LOC_Os05g23260 | Os05g0297900 | - | Detail |
| C1H5g25182 | 5:10,618,182-10,622,288 | + | C2H5g00289 | CX5g038270 | LOC_Os05g23320 | Os05g0298200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g25606 | 3:5,617,924-5,626,626 | - | C1H3g11455 | CX3g031100 | LOC_Os03g12160 | Os03g0221800 | - | Detail |
| C2H3g28200 | 3:5,629,758-5,631,757 | - | C1H3g05328 | CX3g028642 | LOC_Os03g12180 | Os03g0222100 | - | Detail |
| C2H3g21744 | 3:5,655,861-5,657,114 | + | C1H3g10920 | - | LOC_Os03g12210 | Os03g0222500 | - | Detail |
| C2H3g09344 | 3:5,664,107-5,666,372 | + | C1H3g07232 | CX3g031317 | LOC_Os03g12230 | Os03g0222600 | - | Detail |
| C2H3g04698 | 3:5,668,849-5,673,629 | + | C1H3g04972 | CX3g028958 | LOC_Os03g12236 | Os03g0222700 | - | Detail |
| C2H3g19892 | 3:5,674,920-5,676,941 | + | C1H3g26972 | CX3g027447 | LOC_Os03g12238 | - | - | Detail |
| C2H3g10667 | 3:5,679,824-5,684,019 | + | C1H3g14957 | CX3g031278 | LOC_Os03g12250 | Os03g0223000 | - | Detail |
| C2H3g29015 | 3:5,690,854-5,692,440 | - | C1H3g14297 | CX3g030840 | LOC_Os03g12260 | Os03g0223100 | CYP94D15, OsCYP94D15 | Detail |
| C2H3g13113 | 3:5,697,671-5,700,203 | + | C1H3g13087 | CX3g029663 | LOC_Os03g12270 | Os03g0223200 | - | Detail |
| C2H3g16993 | 3:5,702,030-5,703,478 | - | C1H3g19225 | CX3g028859 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| C2H3g28472 | 3:5,703,831-5,706,150 | - | C1H3g05930 | CX3g028859 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| C2H3g01042 | 3:5,710,893-5,718,986 | - | C1H3g02751 | CX3g025777 | LOC_Os03g12300 | Os03g0223700 | - | Detail |
| C2H3g20060 | 3:5,730,175-5,734,820 | + | C1H3g05662 | CX3g029397 | LOC_Os03g12320 | Os03g0223900 | OsLPXC | Detail |
| C2H3g29213 | 3:5,743,380-5,748,702 | + | C1H3g16565 | CX3g029992 | LOC_Os03g12350 | Os03g0224200 | - | Detail |
| C2H3g11335 | 3:5,749,246-5,753,687 | - | C1H3g12418 | CX3g029383 | LOC_Os03g12360 | Os03g0224300 | - | Detail |
| C2H3g05885 | 3:5,765,625-5,769,411 | + | C1H3g18389 | CX3g025920 | LOC_Os03g12370 | Os03g0224700 | - | Detail |
| C2H3g25300 | 3:5,773,342-5,774,361 | - | C1H3g09012 | CX3g025136 | LOC_Os03g12390 | Os03g0225100 | MPKK10.2, OsMKK10-2, MKK10-2D | Detail |
| C2H3g05543 | 3:5,781,025-5,785,623 | - | C1H3g14793 | CX3g027495 | LOC_Os03g12414 | Os03g0225200 | - | Detail |
| C2H3g22350 | 3:5,787,025-5,788,437 | - | C1H3g12506 | CX3g027176 | LOC_Os03g12430 | Os03g0225300 | - | Detail |
| C2H3g21341 | 3:5,789,758-5,791,688 | + | C1H3g26939 | CX3g025280 | LOC_Os03g12440 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |