| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06044 | 5:8,732,534-8,738,092 | - | C2H5g03374 | CX5g040958 | LOC_Os05g19630 | Os05g0277300 | - | Detail |
| C1H5g02530 | 5:8,760,037-8,760,783 | + | C2H5g20956 | CX5g038137 | LOC_Os05g19670 | Os05g0277500 | - | Detail |
| C1H5g11498 | 5:8,792,083-8,797,263 | - | C2H5g25018 | CX5g037933 | LOC_Os05g19910 | Os05g0278500 | OsFMT, OsFMT1, OsAT5, OsAT5/OsFMT | Detail |
| C1H5g29704 | 5:8,828,494-8,835,493 | - | C2H5g28009 | CX5g039281 | LOC_Os05g19954 | Os05g0279300 | - | Detail |
| C1H5g23736 | 5:8,893,494-8,899,217 | + | C2H5g12080 | CX5g037702 | LOC_Os05g19970 | Os05g0279400 | - | Detail |
| C1H5g23078 | 5:8,917,761-8,927,257 | + | C2H5g08718 | CX5g039549 | LOC_Os05g19974 | Os05g0279600 | - | Detail |
| C1H5g13096 | 5:8,934,229-8,937,379 | + | C2H5g23273 | CX5g039172 | LOC_Os05g20020 | Os05g0279900 | - | Detail |
| C1H5g28156 | 5:8,974,209-8,975,740 | + | C2H5g23868 | CX5g039890 | - | Os05g0480700 | - | Detail |
| C1H5g25005 | 5:8,980,073-8,981,614 | - | C2H5g01527 | CX5g040064 | LOC_Os05g20050 | Os05g0280200 | - | Detail |
| C1H5g26284 | 5:9,051,646-9,054,481 | - | C2H5g28478 | CX5g038222 | LOC_Os05g20100 | Os05g0280500 | - | Detail |
| C1H5g03157 | 5:9,120,269-9,120,637 | - | C2H5g02247 | CX5g038694 | LOC_Os05g20420 | - | - | Detail |
| C1H5g29214 | 5:9,133,203-9,134,894 | - | C2H5g18533 | - | - | - | - | Detail |
| C1H5g05125 | 5:9,134,991-9,135,359 | - | C2H5g18533 | - | - | - | - | Detail |
| C1H5g08577 | 5:9,139,631-9,141,530 | - | C2H5g23953 | - | - | - | - | Detail |
| C1H5g05724 | 5:9,683,767-9,688,347 | + | C2H5g14404 | CX5g036941 | LOC_Os05g21180 | Os05g0287800 | OsIPCS3 | Detail |
| C1H5g04296 | 5:9,919,264-9,919,647 | + | C2H5g08960 | CX5g039313 | - | Os05g0289100 | - | Detail |
| C1H5g30033 | 5:9,921,175-9,923,640 | + | C2H3g30122 | CX6g041640 | - | Os04g0412350 | - | Detail |
| C1H5g26586 | 5:9,950,371-9,955,328 | - | C2H5g21346 | CX5g040894 | LOC_Os05g22260 | Os05g0289400 | - | Detail |
| C1H5g29959 | 5:9,956,464-9,956,942 | - | C2H5g29326 | CX5g040964 | LOC_Os05g22270 | - | - | Detail |
| C1H5g08048 | 5:9,965,097-9,966,597 | + | C2H5g03823 | CX5g040911 | LOC_Os05g22300 | Os05g0289700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g28190 | 9:9,609,159-9,613,593 | - | C1H9g01685 | CX9g055402 | LOC_Os09g18320 | Os09g0352400 | - | Detail |
| C2H9g21101 | 9:9,620,738-9,621,136 | - | - | - | - | - | - | Detail |
| C2H9g20351 | 9:9,623,036-9,623,672 | - | - | CX9g056083 | - | - | - | Detail |
| C2H9g03152 | 9:9,623,705-9,623,950 | + | - | CX9g055139 | - | - | - | Detail |
| C2H9g30412 | 9:9,632,947-9,641,239 | - | C1H9g17851 | CX9g057843 | LOC_Os09g18360 | Os09g0353200 | - | Detail |
| C2H9g08214 | 9:9,653,834-9,656,647 | + | C1H9g04955 | CX9g055425 | LOC_Os09g18390 | Os09g0353400 | - | Detail |
| C2H9g27520 | 9:9,666,615-9,667,415 | + | C1H9g29305 | CX9g055425 | LOC_Os09g18520 | Os09g0354300 | - | Detail |
| C2H9g11760 | 9:9,670,309-9,675,875 | + | C1H9g07758 | CX9g055425 | LOC_Os09g18450 | Os09g0353700 | - | Detail |
| C2H9g08714 | 9:9,678,511-9,680,256 | + | C1H9g19178 | CX9g055968 | LOC_Os09g18450 | Os09g0354100 | - | Detail |
| C2H9g09770 | 9:9,691,099-9,693,155 | - | C1H9g24256 | CX9g056896 | LOC_Os09g18530 | Os09g0355400 | - | Detail |
| C2H9g15417 | 9:9,694,571-9,697,027 | - | C1H9g24532 | CX9g056896 | LOC_Os09g18540 | Os09g0349600 | - | Detail |
| C2H9g18054 | 9:9,700,782-9,700,982 | - | C1H12g16817 | CX9g055807 | - | - | - | Detail |
| C2H9g16060 | 9:9,703,071-9,704,331 | - | C1H9g06855 | CX9g055165 | LOC_Os09g18620 | Os09g0356200 | - | Detail |
| C2H9g17839 | 9:9,734,592-9,736,162 | + | C1H9g24532 | CX9g055165 | LOC_Os09g18540 | Os09g0358700 | OsCBM1, OsMRLP15 | Detail |
| C2H9g18289 | 9:9,741,700-9,743,725 | + | C1H9g24256 | CX9g056896 | LOC_Os09g18530 | Os09g0348600 | - | Detail |
| C2H9g01606 | 9:9,747,298-9,750,186 | - | C1H9g17851 | CX9g057279 | LOC_Os09g19140 | Os09g0356000 | - | Detail |
| C2H9g04789 | 9:9,752,412-9,756,190 | - | C1H9g30812 | CX9g057279 | LOC_Os09g19140 | Os09g0356000 | - | Detail |
| C2H9g12232 | 9:9,769,247-9,778,995 | + | C1H9g15807 | CX9g055760 | LOC_Os09g18530 | Os09g0356200 | - | Detail |
| C2H9g05573 | 9:9,769,680-9,779,721 | - | - | - | - | - | - | Detail |
| C2H9g05612 | 9:9,781,558-9,782,037 | + | - | CX9g055923 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |