| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06044 | 5:8,732,534-8,738,092 | - | C2H5g03374 | CX5g040958 | LOC_Os05g19630 | Os05g0277300 | - | Detail |
| C1H5g02530 | 5:8,760,037-8,760,783 | + | C2H5g20956 | CX5g038137 | LOC_Os05g19670 | Os05g0277500 | - | Detail |
| C1H5g11498 | 5:8,792,083-8,797,263 | - | C2H5g25018 | CX5g037933 | LOC_Os05g19910 | Os05g0278500 | OsFMT, OsFMT1, OsAT5, OsAT5/OsFMT | Detail |
| C1H5g29704 | 5:8,828,494-8,835,493 | - | C2H5g28009 | CX5g039281 | LOC_Os05g19954 | Os05g0279300 | - | Detail |
| C1H5g23736 | 5:8,893,494-8,899,217 | + | C2H5g12080 | CX5g037702 | LOC_Os05g19970 | Os05g0279400 | - | Detail |
| C1H5g23078 | 5:8,917,761-8,927,257 | + | C2H5g08718 | CX5g039549 | LOC_Os05g19974 | Os05g0279600 | - | Detail |
| C1H5g13096 | 5:8,934,229-8,937,379 | + | C2H5g23273 | CX5g039172 | LOC_Os05g20020 | Os05g0279900 | - | Detail |
| C1H5g28156 | 5:8,974,209-8,975,740 | + | C2H5g23868 | CX5g039890 | - | Os05g0480700 | - | Detail |
| C1H5g25005 | 5:8,980,073-8,981,614 | - | C2H5g01527 | CX5g040064 | LOC_Os05g20050 | Os05g0280200 | - | Detail |
| C1H5g26284 | 5:9,051,646-9,054,481 | - | C2H5g28478 | CX5g038222 | LOC_Os05g20100 | Os05g0280500 | - | Detail |
| C1H5g03157 | 5:9,120,269-9,120,637 | - | C2H5g02247 | CX5g038694 | LOC_Os05g20420 | - | - | Detail |
| C1H5g29214 | 5:9,133,203-9,134,894 | - | C2H5g18533 | - | - | - | - | Detail |
| C1H5g05125 | 5:9,134,991-9,135,359 | - | C2H5g18533 | - | - | - | - | Detail |
| C1H5g08577 | 5:9,139,631-9,141,530 | - | C2H5g23953 | - | - | - | - | Detail |
| C1H5g05724 | 5:9,683,767-9,688,347 | + | C2H5g14404 | CX5g036941 | LOC_Os05g21180 | Os05g0287800 | OsIPCS3 | Detail |
| C1H5g04296 | 5:9,919,264-9,919,647 | + | C2H5g08960 | CX5g039313 | - | Os05g0289100 | - | Detail |
| C1H5g30033 | 5:9,921,175-9,923,640 | + | C2H3g30122 | CX6g041640 | - | Os04g0412350 | - | Detail |
| C1H5g26586 | 5:9,950,371-9,955,328 | - | C2H5g21346 | CX5g040894 | LOC_Os05g22260 | Os05g0289400 | - | Detail |
| C1H5g29959 | 5:9,956,464-9,956,942 | - | C2H5g29326 | CX5g040964 | LOC_Os05g22270 | - | - | Detail |
| C1H5g08048 | 5:9,965,097-9,966,597 | + | C2H5g03823 | CX5g040911 | LOC_Os05g22300 | Os05g0289700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g24480 | 1:27,622,046-27,624,193 | + | C1H1g17968 | CX1g004845 | LOC_Os01g53900 | Os01g0742200 | - | Detail |
| C2H1g04401 | 1:27,639,382-27,643,061 | + | C1H1g30211 | CX1g007266 | LOC_Os01g53920 | Os01g0742400 | OsASLRK | Detail |
| C2H1g05690 | 1:27,643,047-27,647,327 | - | C1H1g16829 | CX1g000337 | LOC_Os01g53930 | Os01g0742500 | OsHXK6 | Detail |
| C2H1g15551 | 1:27,649,272-27,650,861 | - | C1H1g31036 | CX1g005919 | LOC_Os01g53940 | Os01g0742766 | - | Detail |
| C2H1g26459 | 1:27,664,808-27,666,678 | + | C1H1g12146 | CX1g007218 | LOC_Os01g53980 | Os01g0743100 | - | Detail |
| C2H1g30365 | 1:27,672,939-27,675,593 | - | C1H1g13979 | CX1g003238 | LOC_Os01g53990 | Os01g0743200 | - | Detail |
| C2H1g07295 | 1:27,682,679-27,687,336 | + | C1H1g20416 | CX1g000573 | LOC_Os01g54010 | Os01g0743300 | - | Detail |
| C2H1g18249 | 1:27,687,445-27,693,586 | - | C1H1g03969 | CX1g001592 | LOC_Os01g54020 | Os01g0743400 | - | Detail |
| C2H1g05014 | 1:27,693,725-27,698,369 | + | C1H1g00803 | CX1g003460 | LOC_Os01g54030 | Os01g0743500 | OscytME3 | Detail |
| C2H1g00803 | 1:27,698,897-27,703,219 | - | C1H1g06840 | CX1g004169 | LOC_Os01g54040 | Os01g0743600 | - | Detail |
| C2H1g15454 | 1:27,706,005-27,712,314 | + | C1H1g16391 | CX1g001390 | LOC_Os01g54050 | Os01g0743800 | - | Detail |
| C2H1g21661 | 1:27,716,012-27,723,513 | + | C1H1g28688 | CX1g003627 | LOC_Os01g54080 | Os01g0744000 | - | Detail |
| C2H1g24378 | 1:27,724,576-27,726,255 | + | C1H1g31382 | CX1g006644 | LOC_Os01g54090 | Os01g0744200 | - | Detail |
| C2H1g18426 | 1:27,727,521-27,732,459 | - | C1H1g10444 | CX1g000737 | LOC_Os01g54100 | Os01g0744300 | - | Detail |
| C2H1g05632 | 1:27,737,125-27,742,058 | + | C1H1g12791 | CX1g000340 | LOC_Os01g45620 | Os01g0643800 | - | Detail |
| C2H1g18422 | 1:27,744,090-27,751,083 | - | C1H1g08595 | CX1g000671 | LOC_Os01g54119 | Os01g0744400 | - | Detail |
| C2H1g03794 | 1:27,760,106-27,760,933 | - | C1H1g04241 | CX1g001906 | LOC_Os01g54170 | Os01g0745000 | - | Detail |
| C2H1g26869 | 1:27,769,110-27,770,779 | - | C1H1g05013 | CX1g000917 | LOC_Os01g54210 | Os01g0745700 | - | Detail |
| C2H1g26719 | 1:27,774,518-27,775,037 | - | C1H1g04265 | - | - | - | - | Detail |
| C2H1g01198 | 1:27,780,702-27,788,717 | + | C1H1g30379 | CX1g002726 | LOC_Os01g54240 | Os01g0746200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |