| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06044 | 5:8,732,534-8,738,092 | - | C2H5g03374 | CX5g040958 | LOC_Os05g19630 | Os05g0277300 | - | Detail |
| C1H5g02530 | 5:8,760,037-8,760,783 | + | C2H5g20956 | CX5g038137 | LOC_Os05g19670 | Os05g0277500 | - | Detail |
| C1H5g11498 | 5:8,792,083-8,797,263 | - | C2H5g25018 | CX5g037933 | LOC_Os05g19910 | Os05g0278500 | OsFMT, OsFMT1, OsAT5, OsAT5/OsFMT | Detail |
| C1H5g29704 | 5:8,828,494-8,835,493 | - | C2H5g28009 | CX5g039281 | LOC_Os05g19954 | Os05g0279300 | - | Detail |
| C1H5g23736 | 5:8,893,494-8,899,217 | + | C2H5g12080 | CX5g037702 | LOC_Os05g19970 | Os05g0279400 | - | Detail |
| C1H5g23078 | 5:8,917,761-8,927,257 | + | C2H5g08718 | CX5g039549 | LOC_Os05g19974 | Os05g0279600 | - | Detail |
| C1H5g13096 | 5:8,934,229-8,937,379 | + | C2H5g23273 | CX5g039172 | LOC_Os05g20020 | Os05g0279900 | - | Detail |
| C1H5g28156 | 5:8,974,209-8,975,740 | + | C2H5g23868 | CX5g039890 | - | Os05g0480700 | - | Detail |
| C1H5g25005 | 5:8,980,073-8,981,614 | - | C2H5g01527 | CX5g040064 | LOC_Os05g20050 | Os05g0280200 | - | Detail |
| C1H5g26284 | 5:9,051,646-9,054,481 | - | C2H5g28478 | CX5g038222 | LOC_Os05g20100 | Os05g0280500 | - | Detail |
| C1H5g03157 | 5:9,120,269-9,120,637 | - | C2H5g02247 | CX5g038694 | LOC_Os05g20420 | - | - | Detail |
| C1H5g29214 | 5:9,133,203-9,134,894 | - | C2H5g18533 | - | - | - | - | Detail |
| C1H5g05125 | 5:9,134,991-9,135,359 | - | C2H5g18533 | - | - | - | - | Detail |
| C1H5g08577 | 5:9,139,631-9,141,530 | - | C2H5g23953 | - | - | - | - | Detail |
| C1H5g05724 | 5:9,683,767-9,688,347 | + | C2H5g14404 | CX5g036941 | LOC_Os05g21180 | Os05g0287800 | OsIPCS3 | Detail |
| C1H5g04296 | 5:9,919,264-9,919,647 | + | C2H5g08960 | CX5g039313 | - | Os05g0289100 | - | Detail |
| C1H5g30033 | 5:9,921,175-9,923,640 | + | C2H3g30122 | CX6g041640 | - | Os04g0412350 | - | Detail |
| C1H5g26586 | 5:9,950,371-9,955,328 | - | C2H5g21346 | CX5g040894 | LOC_Os05g22260 | Os05g0289400 | - | Detail |
| C1H5g29959 | 5:9,956,464-9,956,942 | - | C2H5g29326 | CX5g040964 | LOC_Os05g22270 | - | - | Detail |
| C1H5g08048 | 5:9,965,097-9,966,597 | + | C2H5g03823 | CX5g040911 | LOC_Os05g22300 | Os05g0289700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g07422 | 5:22,642,574-22,644,790 | - | C1H5g30870 | CX5g038064 | LOC_Os05g46690 | Os05g0544600 | - | Detail |
| C2H5g03355 | 5:22,648,184-22,650,047 | - | C1H5g10393 | CX5g038009 | LOC_Os05g46710 | Os05g0544900 | - | Detail |
| C2H5g19788 | 5:22,654,646-22,659,830 | + | C1H5g19841 | CX5g039949 | LOC_Os05g46720 | Os05g0545000 | - | Detail |
| C2H5g01084 | 5:22,665,060-22,675,567 | - | C1H5g28488 | CX5g039251 | LOC_Os05g46740 | Os05g0545300 | - | Detail |
| C2H5g27152 | 5:22,681,596-22,682,909 | - | C1H5g07171 | CX5g040715 | LOC_Os05g46760 | Os05g0545400 | - | Detail |
| C2H5g05544 | 5:22,686,480-22,691,402 | + | - | - | - | - | - | Detail |
| C2H5g06020 | 5:22,696,950-22,702,172 | + | C1H5g28842 | CX5g040995 | LOC_Os05g46860 | Os05g0545600 | - | Detail |
| C2H5g12310 | 5:22,706,543-22,707,058 | + | C1H5g11625 | CX5g038306 | LOC_Os05g46790 | Os05g0546400 | - | Detail |
| C2H5g18437 | 5:22,708,692-22,710,601 | + | C1H5g30534 | CX5g039852 | LOC_Os05g46800 | Os05g0545900 | - | Detail |
| C2H5g16888 | 5:22,715,981-22,716,661 | + | C1H5g01044 | CX5g040967 | LOC_Os05g46830 | Os05g0546300 | - | Detail |
| C2H5g27430 | 5:22,719,194-22,719,894 | - | - | CX5g039150 | - | - | - | Detail |
| C2H5g26619 | 5:22,722,084-22,722,893 | + | C1H5g21422 | CX5g038306 | LOC_Os05g46840 | Os05g0546400 | - | Detail |
| C2H5g22705 | 5:22,724,763-22,726,511 | - | C1H5g08788 | CX5g037119 | LOC_Os05g47446 | Os05g0547850 | OsPDCD5 | Detail |
| C2H5g02769 | 5:22,732,142-22,732,777 | + | C1H5g20241 | CX5g036931 | LOC_Os05g47470 | Os05g0548100 | - | Detail |
| C2H5g11129 | 5:22,735,303-22,736,253 | - | C1H5g30022 | CX5g038940 | LOC_Os05g47480 | Os05g0548200 | - | Detail |
| C2H5g21680 | 5:22,738,159-22,744,169 | + | C1H5g19984 | CX5g039873 | LOC_Os05g47490 | Os05g0548300 | - | Detail |
| C2H5g06103 | 5:22,746,540-22,753,216 | + | C1H5g17282 | CX5g036974 | LOC_Os05g47500 | Os05g0548500 | - | Detail |
| C2H5g19664 | 5:22,753,521-22,754,855 | + | C1H5g08583 | CX5g038468 | LOC_Os05g47510 | Os05g0548600 | qGSN5 | Detail |
| C2H5g21416 | 5:22,755,411-22,757,608 | - | C1H5g05315 | CX5g040999 | LOC_Os05g47530 | Os05g0548800 | - | Detail |
| C2H5g15278 | 5:22,758,416-22,762,952 | - | C1H5g25644 | CX5g037857 | LOC_Os05g47545 | Os05g0548900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |