| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g29871 | 5:8,459,655-8,460,486 | - | C2H5g06365 | CX5g038788 | - | - | - | Detail |
| C1H5g22297 | 5:8,460,128-8,461,011 | + | C2H5g07418 | CX5g040066 | LOC_Os05g18780 | - | - | Detail |
| C1H5g23740 | 5:8,462,941-8,464,518 | + | C2H5g07418 | CX5g038825 | LOC_Os05g18780 | Os05g0270500 | - | Detail |
| C1H5g05288 | 5:8,509,880-8,513,967 | + | C2H8g04421 | CX10g009598 | - | - | - | Detail |
| C1H5g07422 | 5:8,520,847-8,524,083 | + | C2H5g13254 | CX5g040763 | LOC_Os05g18770 | Os05g0270200 | OsSUN1 | Detail |
| C1H5g12896 | 5:8,526,925-8,530,245 | - | C2H5g22742 | CX5g038173 | LOC_Os05g18750 | Os05g0270000 | - | Detail |
| C1H5g04723 | 5:8,541,545-8,543,558 | - | C2H5g20813 | CX5g040818 | LOC_Os05g19150 | Os05g0273800 | - | Detail |
| C1H5g19633 | 5:8,561,249-8,562,663 | - | C2H4g29979 | CX4g032396 | - | - | - | Detail |
| C1H5g24613 | 5:8,566,947-8,575,810 | + | C2H5g23596 | CX5g037963 | LOC_Os05g19270 | Os05g0274200 | MSH2, OsMSH2 | Detail |
| C1H5g22471 | 5:8,578,996-8,584,614 | + | C2H5g05262 | CX5g038105 | LOC_Os05g19280 | Os05g0274300 | - | Detail |
| C1H5g09467 | 5:8,615,152-8,616,720 | + | C2H5g00274 | CX5g040495 | LOC_Os05g19370 | Os05g0274900 | - | Detail |
| C1H5g29936 | 5:8,617,414-8,618,676 | - | - | - | - | Os05g0274950 | - | Detail |
| C1H5g23375 | 5:8,618,802-8,621,186 | - | C2H5g21767 | CX5g040741 | LOC_Os05g19380 | Os05g0275000 | - | Detail |
| C1H5g00832 | 5:8,626,045-8,628,861 | - | C2H5g00793 | CX5g040347 | LOC_Os05g19390 | Os05g0275100 | OsPPR939 | Detail |
| C1H5g06892 | 5:8,632,541-8,637,656 | + | C2H5g02127 | CX5g039057 | LOC_Os05g19470 | - | - | Detail |
| C1H5g22556 | 5:8,638,486-8,644,753 | - | C2H5g11590 | - | LOC_Os05g19480 | Os05g0275700 | - | Detail |
| C1H5g03721 | 5:8,663,246-8,665,737 | + | C2H5g02832 | CX5g039415 | LOC_Os05g19500 | Os05g0276100 | OsCHX14 | Detail |
| C1H5g26241 | 5:8,669,247-8,670,507 | - | - | - | - | - | - | Detail |
| C1H5g26341 | 5:8,689,678-8,691,125 | - | C2H5g28905 | CX5g040110 | LOC_Os05g19570 | Os05g0276500 | OsEXPA3 | Detail |
| C1H5g09212 | 5:8,714,705-8,715,715 | - | C2H5g07930 | CX5g038660 | LOC_Os05g19600 | Os05g0277000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01651 | 1:19,206,210-19,207,044 | + | C1H1g29224 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C2H1g18000 | 1:19,208,125-19,208,987 | - | C1H1g31306 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C2H1g11282 | 1:19,219,443-19,220,061 | - | C1H1g07257 | CX1g004093 | - | Os01g0762000 | - | Detail |
| C2H1g18173 | 1:19,246,906-19,248,195 | - | C1H1g05766 | - | LOC_Os01g38090 | Os01g0562600 | - | Detail |
| C2H1g08899 | 1:19,248,870-19,258,147 | + | C1H1g14910 | - | LOC_Os01g38130 | Os01g0562400 | - | Detail |
| C2H1g03153 | 1:19,265,312-19,266,658 | - | C1H1g17141 | - | LOC_Os01g38430 | Os01g0562600 | - | Detail |
| C2H1g24757 | 1:19,271,352-19,274,583 | + | C1H1g25180 | CX1g001538 | LOC_Os01g38229 | Os01g0563000 | - | Detail |
| C2H1g25581 | 1:19,278,536-19,281,426 | - | C1H1g26653 | CX1g002676 | LOC_Os01g38480 | Os01g0565600 | - | Detail |
| C2H1g19973 | 1:19,283,653-19,285,365 | - | C1H1g06422 | CX1g003543 | LOC_Os01g38500 | Os01g0565800 | - | Detail |
| C2H1g30274 | 1:19,291,865-19,297,892 | - | C1H1g16023 | CX1g005683 | LOC_Os01g38530 | Os01g0566100 | OsELF3.2, ELF3_chr.1, OsELF3-2 | Detail |
| C2H1g05106 | 1:19,307,462-19,310,165 | - | C1H1g13897 | CX1g000412 | LOC_Os01g38580 | Os01g0566500 | - | Detail |
| C2H1g12854 | 1:19,341,446-19,346,845 | - | C1H1g22416 | CX1g003127 | LOC_Os01g38620 | Os01g0566900 | - | Detail |
| C2H1g22209 | 1:19,360,865-19,362,875 | + | C1H1g20878 | CX1g006382 | LOC_Os01g38670 | Os01g0567500 | OsMST8 | Detail |
| C2H1g08093 | 1:19,364,872-19,366,736 | - | C1H1g27966 | CX1g003104 | LOC_Os01g38680 | Os01g0567600 | OsMST7, OsSTP7 | Detail |
| C2H1g28975 | 1:19,395,895-19,401,543 | - | C1H1g10384 | CX1g002815 | LOC_Os01g38850 | Os01g0568400 | Gnk2RLK-3 | Detail |
| C2H1g22055 | 1:19,415,858-19,419,271 | + | C1H1g11385 | CX1g006699 | LOC_Os01g38880 | Os01g0569200 | - | Detail |
| C2H1g20871 | 1:19,426,933-19,427,151 | + | C1H1g23492 | - | - | - | - | Detail |
| C2H1g08516 | 1:19,442,108-19,450,861 | - | C1H1g16258 | CX1g007140 | LOC_Os01g38910 | Os01g0568800 | Gnk2-K1 | Detail |
| C2H1g24947 | 1:19,480,533-19,485,734 | + | C1H1g21031 | CX1g005732 | LOC_Os01g38950 | Os01g0570500 | - | Detail |
| C2H1g24876 | 1:19,488,660-19,489,562 | - | C1H1g03105 | CX1g006869 | LOC_Os01g38960 | Os01g0570601 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |