| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g13669 | 5:7,463,795-7,468,267 | - | C2H5g10863 | CX5g039794 | LOC_Os05g16230 | Os05g0251200 | - | Detail |
| C1H5g11478 | 5:7,471,901-7,473,157 | - | C2H5g12394 | CX5g039447 | LOC_Os05g16240 | Os05g0251200 | - | Detail |
| C1H5g13415 | 5:7,474,950-7,479,303 | + | C2H5g03213 | CX5g038303 | LOC_Os05g16250 | Os05g0251400 | OsBVF1, P31<sup>comet</sup> | Detail |
| C1H5g25482 | 5:7,481,388-7,484,201 | + | C2H5g18069 | CX5g038303 | - | Os05g0251500 | - | Detail |
| C1H5g22880 | 5:7,487,995-7,491,891 | + | C2H5g11253 | CX5g037603 | - | - | - | Detail |
| C1H5g03577 | 5:7,489,093-7,494,918 | - | C2H5g17103 | CX5g040268 | LOC_Os05g16280 | Os05g0251900 | - | Detail |
| C1H5g13508 | 5:7,497,940-7,502,969 | - | C2H5g24772 | CX5g041044 | LOC_Os05g16290 | Os05g0252000 | - | Detail |
| C1H5g26814 | 5:7,514,364-7,516,023 | - | C2H5g01822 | CX5g037929 | LOC_Os05g16300 | Os05g0252100 | - | Detail |
| C1H5g13165 | 5:7,560,818-7,561,289 | + | C2H5g15484 | CX5g039636 | LOC_Os05g16420 | Os05g0253200 | - | Detail |
| C1H5g26412 | 5:7,633,753-7,637,377 | + | C2H5g01726 | CX5g040627 | LOC_Os05g16630 | Os05g0255600 | - | Detail |
| C1H5g13724 | 5:7,640,895-7,645,875 | + | C2H5g24880 | CX5g040616 | LOC_Os05g16640 | Os05g0255800 | - | Detail |
| C1H5g15674 | 5:7,650,875-7,656,493 | + | C2H5g00655 | CX5g039252 | LOC_Os05g16660 | Os05g0256000 | - | Detail |
| C1H5g11784 | 5:7,669,303-7,680,295 | + | C2H5g00991 | CX5g038401 | LOC_Os05g16430 | Os05g0256100 | - | Detail |
| C1H5g15820 | 5:7,730,571-7,741,013 | + | C2H5g02628 | CX5g040531 | LOC_Os05g16430 | Os05g0256500 | - | Detail |
| C1H5g24182 | 5:7,766,659-7,776,349 | + | C2H5g15704 | CX5g039056 | LOC_Os05g16430 | Os05g0257100 | - | Detail |
| C1H5g28432 | 5:7,780,957-7,781,515 | + | C2H5g05784 | CX3g030223 | - | - | - | Detail |
| C1H5g26063 | 5:7,817,075-7,823,465 | + | C2H5g12556 | CX5g036934 | LOC_Os05g16420 | Os05g0253200 | - | Detail |
| C1H5g03004 | 5:7,845,727-7,846,645 | + | C2H5g12556 | CX5g038401 | - | Os05g0261700 | - | Detail |
| C1H5g04336 | 5:7,847,001-7,848,449 | + | C2H5g07983 | CX5g036934 | LOC_Os05g16670 | Os05g0263100 | - | Detail |
| C1H5g16401 | 5:7,855,230-7,860,196 | + | C2H5g15568 | CX5g038074 | LOC_Os05g16740 | Os05g0263100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g25945 | 2:22,072,373-22,074,778 | - | C1H2g19217 | CX2g020401 | LOC_Os02g39050 | Os02g0602500 | - | Detail |
| C2H2g15073 | 2:22,076,253-22,078,680 | + | C1H2g29222 | CX2g021796 | LOC_Os02g39060 | Os02g0602600 | - | Detail |
| C2H2g27145 | 2:22,079,588-22,082,236 | - | C1H2g09570 | CX2g022278 | LOC_Os02g39064 | Os02g0531600 | RCN2 | Detail |
| C2H2g30445 | 2:22,094,815-22,096,512 | + | C1H2g17259 | CX2g024024 | LOC_Os02g39070 | Os02g0602800 | - | Detail |
| C2H2g19659 | 2:22,102,027-22,102,784 | + | C1H2g03610 | CX2g021835 | - | - | - | Detail |
| C2H2g24555 | 2:22,105,183-22,106,553 | - | C1H2g20212 | CX2g020424 | LOC_Os02g39090 | Os02g0603000 | OsAGC4 | Detail |
| C2H2g27827 | 2:22,108,502-22,110,376 | - | C1H2g21236 | CX2g020964 | LOC_Os02g39100 | Os02g0603100 | OsCLV2a | Detail |
| C2H2g20892 | 2:22,122,743-22,123,215 | + | C1H2g07346 | CX2g022997 | LOC_Os02g39140 | - | - | Detail |
| C2H2g27155 | 2:22,128,632-22,130,939 | + | C1H2g07346 | CX2g022997 | LOC_Os02g39140 | Os02g0603600 | - | Detail |
| C2H2g10599 | 2:22,133,522-22,139,389 | - | C1H2g23468 | CX2g021542 | LOC_Os02g39160 | Os02g0603800 | - | Detail |
| C2H2g08621 | 2:22,142,262-22,143,937 | - | C1H2g00229 | CX2g019195 | LOC_Os02g39170 | Os02g0604000 | - | Detail |
| C2H2g01119 | 2:22,144,421-22,146,787 | + | C1H2g26276 | CX2g018995 | LOC_Os02g39180 | Os02g0604100 | - | Detail |
| C2H2g12305 | 2:22,153,795-22,159,070 | + | C1H2g11701 | CX2g022447 | LOC_Os02g39200 | Os02g0604300 | - | Detail |
| C2H2g06496 | 2:22,174,257-22,175,282 | + | C1H2g22579 | CX2g023372 | LOC_Os02g39220 | Os02g0604600 | - | Detail |
| C2H2g28150 | 2:22,175,286-22,175,765 | + | C1H2g21841 | CX2g019853 | LOC_Os02g39220 | Os02g0605000 | - | Detail |
| C2H2g25914 | 2:22,179,268-22,180,470 | + | C1H2g22869 | CX2g020508 | LOC_Os02g39430 | Os02g0607100 | - | Detail |
| C2H2g26330 | 2:22,183,348-22,186,215 | + | C1H2g16417 | CX2g024609 | LOC_Os02g39240 | Os02g0604800 | - | Detail |
| C2H2g28164 | 2:22,189,898-22,191,238 | + | C1H2g21841 | CX2g019853 | LOC_Os02g39260 | Os02g0605000 | - | Detail |
| C2H2g30589 | 2:22,193,722-22,194,669 | - | - | CX2g023985 | - | - | - | Detail |
| C2H2g18535 | 2:22,200,214-22,205,132 | + | C1H2g08732 | CX2g021010 | LOC_Os02g39280 | Os02g0605400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |