| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g00162 | 5:7,220,804-7,229,758 | - | C2H5g24404 | CX5g038630 | LOC_Os05g15510 | Os05g0244500 | - | Detail |
| C1H5g31257 | 5:7,234,724-7,236,540 | - | C2H5g30215 | CX5g036965 | LOC_Os05g15520 | Os05g0244600 | - | Detail |
| C1H5g13197 | 5:7,237,936-7,239,107 | - | C2H5g00713 | CX5g036965 | LOC_Os05g15520 | Os05g0244600 | - | Detail |
| C1H5g00253 | 5:7,243,262-7,245,114 | - | C2H5g02887 | CX5g037890 | LOC_Os05g15530 | Os05g0244700 | - | Detail |
| C1H5g26136 | 5:7,250,500-7,250,844 | - | - | - | - | Os05g0244800 | - | Detail |
| C1H5g27890 | 5:7,251,326-7,251,562 | - | - | - | - | Os05g0244800 | - | Detail |
| C1H5g10892 | 5:7,257,940-7,259,896 | - | C2H5g06039 | CX5g038182 | LOC_Os05g15630 | Os05g0245300 | - | Detail |
| C1H5g12518 | 5:7,273,469-7,274,600 | - | C2H5g27749 | CX5g040969 | LOC_Os05g15690 | Os05g0246300 | - | Detail |
| C1H5g27464 | 5:7,282,123-7,286,926 | + | C2H5g09714 | CX5g040988 | LOC_Os05g15720 | Os05g0246600 | - | Detail |
| C1H5g25228 | 5:7,301,097-7,302,264 | - | C2H5g17115 | CX5g038349 | - | - | - | Detail |
| C1H5g21179 | 5:7,304,057-7,304,950 | - | C2H5g03508 | CX5g038349 | LOC_Os05g15770 | Os05g0247100 | DIP3, XIP, OsHI-XIP | Detail |
| C1H5g04227 | 5:7,346,575-7,355,000 | - | C2H5g09723 | CX5g040966 | LOC_Os05g15890 | Os05g0247900 | OsCHR713, CHR713 | Detail |
| C1H5g29560 | 5:7,375,313-7,377,173 | - | C2H5g16380 | CX5g038055 | LOC_Os05g16000 | Os05g0249800 | - | Detail |
| C1H5g10784 | 5:7,390,515-7,391,071 | - | C2H5g23841 | CX5g038858 | LOC_Os05g16054 | Os05g0249100 | - | Detail |
| C1H5g23916 | 5:7,402,240-7,403,832 | - | C2H5g15350 | CX5g039101 | LOC_Os05g16140 | Os05g0250000 | - | Detail |
| C1H5g31532 | 5:7,403,905-7,404,108 | - | - | - | - | - | - | Detail |
| C1H5g17383 | 5:7,412,971-7,413,981 | - | C2H5g06835 | CX5g039101 | LOC_Os05g16240 | Os05g0250200 | - | Detail |
| C1H5g19855 | 5:7,421,621-7,422,047 | - | C2H5g10190 | CX5g038245 | LOC_Os05g16180 | Os05g0250700 | - | Detail |
| C1H5g05722 | 5:7,433,234-7,433,720 | - | C2H5g10190 | CX5g038245 | LOC_Os05g16200 | Os05g0250700 | - | Detail |
| C1H5g18798 | 5:7,438,232-7,441,723 | - | C2H5g10190 | CX5g038245 | LOC_Os05g16200 | Os05g0250700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24146 | 3:902,277-905,502 | + | C1H3g21463 | - | LOC_Os03g02820 | Os03g0120000 | - | Detail |
| C2H3g12012 | 3:905,885-908,766 | - | C1H3g16632 | CX3g031103 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| C2H3g14284 | 3:910,317-914,198 | - | C1H3g08934 | CX3g026078 | LOC_Os03g02840 | Os03g0120200 | - | Detail |
| C2H3g02407 | 3:923,819-927,470 | - | C1H3g03441 | CX3g026290 | LOC_Os03g02850 | Os03g0120300 | - | Detail |
| C2H3g11600 | 3:929,349-930,854 | - | C1H3g10934 | CX3g025360 | LOC_Os03g02860 | Os03g0120400 | - | Detail |
| C2H3g16408 | 3:944,013-947,894 | + | C1H3g08539 | CX3g028149 | LOC_Os03g02890 | Os03g0120800 | - | Detail |
| C2H3g18948 | 3:960,186-961,118 | + | C1H3g19352 | CX3g029289 | LOC_Os03g02900 | Os03g0120900 | - | Detail |
| C2H3g18738 | 3:978,379-982,304 | - | C1H3g28264 | CX3g025034 | LOC_Os03g02920 | Os03g0121200 | - | Detail |
| C2H3g23557 | 3:984,957-986,513 | - | C1H3g20047 | CX3g026688 | LOC_Os03g02939 | Os03g0121300 | - | Detail |
| C2H3g04065 | 3:993,230-994,504 | + | C1H3g01141 | CX3g025202 | LOC_Os03g02960 | Os03g0121700 | - | Detail |
| C2H3g16968 | 3:994,604-1,003,811 | - | C1H3g02111 | CX3g027774 | LOC_Os03g02970 | Os03g0121800 | DCL1, Dcl1, OsDCL1, osDCL1, Os-DCL1 | Detail |
| C2H3g23905 | 3:1,015,206-1,021,163 | + | C1H3g23785 | CX3g028931 | LOC_Os03g02980 | Os03g0122000 | - | Detail |
| C2H3g27024 | 3:1,028,901-1,029,277 | + | C1H3g05090 | - | - | - | - | Detail |
| C2H3g24994 | 3:1,029,464-1,032,408 | + | C1H3g07706 | CX3g026004 | LOC_Os03g03000 | Os03g0122100 | - | Detail |
| C2H3g11967 | 3:1,035,229-1,037,122 | - | C1H3g24387 | CX3g025069 | LOC_Os03g03020 | Os03g0122200 | - | Detail |
| C2H3g05774 | 3:1,038,204-1,043,973 | - | C1H3g05611 | CX3g031243 | LOC_Os03g03034 | Os03g0122300 | - | Detail |
| C2H3g15040 | 3:1,057,763-1,062,339 | - | C1H3g26838 | CX3g027036 | LOC_Os03g03070 | Os03g0122600 | - | Detail |
| C2H3g28462 | 3:1,082,037-1,083,831 | - | C1H3g04456 | CX3g025481 | LOC_Os03g03100 | Os03g0834466 | - | Detail |
| C2H3g16267 | 3:1,095,728-1,096,384 | + | C1H3g18665 | CX3g031045 | - | - | - | Detail |
| C2H3g19854 | 3:1,097,016-1,100,081 | + | C1H3g16789 | CX3g030103 | LOC_Os03g03130 | Os03g0123100 | OsSCE2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |