| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02804 | 5:6,439,314-6,440,576 | - | C2H5g03653 | CX5g040020 | LOC_Os05g13830 | Os05g0225800 | - | Detail |
| C1H5g10162 | 5:6,461,499-6,467,250 | - | C2H5g02747 | CX5g038294 | LOC_Os05g13950 | Os05g0227700 | - | Detail |
| C1H5g19329 | 5:6,468,027-6,469,256 | + | C2H5g07936 | CX5g037077 | LOC_Os05g13960 | Os05g0227800 | - | Detail |
| C1H5g22405 | 5:6,476,404-6,481,147 | - | C2H5g05694 | CX5g037937 | LOC_Os05g13970 | Os05g0228000 | - | Detail |
| C1H5g20540 | 5:6,493,474-6,501,091 | - | C2H5g19208 | CX5g037757 | LOC_Os05g14010 | Os05g0228400 | - | Detail |
| C1H5g09055 | 5:6,546,925-6,547,512 | + | C2H5g10323 | CX5g038878 | LOC_Os05g14130 | Os05g0286100 | OsZFP350 | Detail |
| C1H5g25378 | 5:6,559,474-6,568,921 | + | C2H5g00942 | CX5g037103 | LOC_Os05g14170 | Os05g0230600 | - | Detail |
| C1H5g10636 | 5:6,585,908-6,589,434 | + | C2H5g20643 | CX5g038357 | LOC_Os05g14180 | Os05g0230700 | - | Detail |
| C1H5g03159 | 5:6,598,306-6,603,975 | - | C2H5g06311 | CX5g040395 | LOC_Os05g14194 | Os05g0230900 | FLO15, OsGLYI7 | Detail |
| C1H5g10690 | 5:6,623,287-6,625,052 | - | C2H5g02872 | CX5g038563 | LOC_Os05g14220 | Os05g0231100 | - | Detail |
| C1H5g26011 | 5:6,688,035-6,690,294 | + | C2H5g24388 | CX5g038538 | LOC_Os05g14240 | Os05g0231700 | - | Detail |
| C1H5g10613 | 5:6,691,906-6,693,331 | - | C2H5g24001 | CX5g039688 | LOC_Os05g14260 | Os05g0499300 | - | Detail |
| C1H5g06357 | 5:6,698,159-6,702,862 | + | C2H5g11100 | CX5g037224 | LOC_Os05g14270 | Os05g0232200 | - | Detail |
| C1H5g14640 | 5:6,703,663-6,704,820 | - | C2H5g09281 | CX5g036769 | LOC_Os05g11370 | Os05g0203500 | - | Detail |
| C1H5g06930 | 5:6,712,797-6,717,868 | + | C2H5g29959 | CX5g038655 | LOC_Os05g14300 | Os05g0232500 | - | Detail |
| C1H5g02144 | 5:6,734,138-6,735,825 | + | C2H5g10865 | CX5g041107 | LOC_Os05g14370 | Os05g0571200 | OsWRKY19 | Detail |
| C1H5g21646 | 5:6,825,795-6,851,545 | + | C2H5g07002 | CX5g040240 | LOC_Os05g08810 | Os05g0235300 | OsTOR, TOR | Detail |
| C1H5g11004 | 5:6,855,983-6,856,536 | - | C2H5g24114 | CX5g040852 | LOC_Os05g14580 | Os05g0235701 | - | Detail |
| C1H5g23614 | 5:6,871,322-6,877,810 | + | C2H5g24097 | CX5g041153 | LOC_Os05g14590 | Os05g0235800 | - | Detail |
| C1H5g11422 | 5:6,910,095-6,916,773 | + | C2H5g30498 | CX5g038991 | LOC_Os05g14730 | Os05g0237100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g08740 | 4:5,837,219-5,840,950 | + | C1H4g27268 | CX4g033727 | LOC_Os04g11760 | Os04g0193950 | - | Detail |
| C2H4g24115 | 4:5,863,103-5,863,795 | + | C1H4g00127 | CX4g034119 | - | - | - | Detail |
| C2H4g01433 | 4:5,877,746-5,884,336 | - | C1H4g11202 | CX4g032821 | LOC_Os04g11820 | Os04g0194500 | - | Detail |
| C2H4g23993 | 4:5,907,269-5,914,707 | + | C1H4g19431 | CX4g034386 | LOC_Os04g11880 | Os04g0195000 | - | Detail |
| C2H4g11331 | 4:5,933,106-5,934,673 | + | C1H4g25694 | CX4g035968 | LOC_Os08g24980 | - | - | Detail |
| C2H4g08911 | 4:5,953,713-5,956,448 | + | C1H4g19937 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| C2H4g17260 | 4:5,977,877-5,980,574 | - | C1H4g07183 | CX4g034245 | LOC_Os04g12010 | Os04g0196600 | - | Detail |
| C2H4g14785 | 4:6,313,890-6,316,207 | - | C1H4g14978 | CX4g034359 | LOC_Os04g12390 | Os04g0330200 | - | Detail |
| C2H4g03396 | 4:6,335,305-6,336,315 | + | - | CX4g032415 | LOC_Os04g12430 | Os04g0200700 | - | Detail |
| C2H4g26962 | 4:6,336,510-6,342,139 | + | - | CX4g032415 | LOC_Os04g12430 | - | - | Detail |
| C2H4g06118 | 4:6,346,027-6,353,840 | - | - | CX4g031446 | - | - | - | Detail |
| C2H4g10504 | 4:6,362,734-6,369,160 | - | C1H4g16105 | CX4g034375 | LOC_Os04g12480 | Os04g0201200 | - | Detail |
| C2H4g26946 | 4:6,396,910-6,405,329 | - | C1H4g17374 | CX4g036106 | LOC_Os04g12499 | Os04g0201500 | OsAAT30 | Detail |
| C2H4g03852 | 4:6,416,375-6,420,043 | - | C1H4g14971 | CX4g034779 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| C2H4g15231 | 4:6,427,164-6,428,727 | + | - | - | - | - | - | Detail |
| C2H4g12193 | 4:6,428,170-6,430,605 | - | C1H4g17048 | CX4g034921 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| C2H4g26627 | 4:6,448,193-6,448,576 | - | - | - | - | Os04g0617200 | - | Detail |
| C2H4g18743 | 4:6,463,388-6,466,416 | - | C1H4g18742 | CX4g032311 | LOC_Os04g12639 | Os04g0203400 | - | Detail |
| C2H4g09802 | 4:6,477,598-6,478,724 | + | C1H4g19896 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C2H4g10760 | 4:6,479,684-6,480,995 | + | C1H4g09867 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |