| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02804 | 5:6,439,314-6,440,576 | - | C2H5g03653 | CX5g040020 | LOC_Os05g13830 | Os05g0225800 | - | Detail |
| C1H5g10162 | 5:6,461,499-6,467,250 | - | C2H5g02747 | CX5g038294 | LOC_Os05g13950 | Os05g0227700 | - | Detail |
| C1H5g19329 | 5:6,468,027-6,469,256 | + | C2H5g07936 | CX5g037077 | LOC_Os05g13960 | Os05g0227800 | - | Detail |
| C1H5g22405 | 5:6,476,404-6,481,147 | - | C2H5g05694 | CX5g037937 | LOC_Os05g13970 | Os05g0228000 | - | Detail |
| C1H5g20540 | 5:6,493,474-6,501,091 | - | C2H5g19208 | CX5g037757 | LOC_Os05g14010 | Os05g0228400 | - | Detail |
| C1H5g09055 | 5:6,546,925-6,547,512 | + | C2H5g10323 | CX5g038878 | LOC_Os05g14130 | Os05g0286100 | OsZFP350 | Detail |
| C1H5g25378 | 5:6,559,474-6,568,921 | + | C2H5g00942 | CX5g037103 | LOC_Os05g14170 | Os05g0230600 | - | Detail |
| C1H5g10636 | 5:6,585,908-6,589,434 | + | C2H5g20643 | CX5g038357 | LOC_Os05g14180 | Os05g0230700 | - | Detail |
| C1H5g03159 | 5:6,598,306-6,603,975 | - | C2H5g06311 | CX5g040395 | LOC_Os05g14194 | Os05g0230900 | FLO15, OsGLYI7 | Detail |
| C1H5g10690 | 5:6,623,287-6,625,052 | - | C2H5g02872 | CX5g038563 | LOC_Os05g14220 | Os05g0231100 | - | Detail |
| C1H5g26011 | 5:6,688,035-6,690,294 | + | C2H5g24388 | CX5g038538 | LOC_Os05g14240 | Os05g0231700 | - | Detail |
| C1H5g10613 | 5:6,691,906-6,693,331 | - | C2H5g24001 | CX5g039688 | LOC_Os05g14260 | Os05g0499300 | - | Detail |
| C1H5g06357 | 5:6,698,159-6,702,862 | + | C2H5g11100 | CX5g037224 | LOC_Os05g14270 | Os05g0232200 | - | Detail |
| C1H5g14640 | 5:6,703,663-6,704,820 | - | C2H5g09281 | CX5g036769 | LOC_Os05g11370 | Os05g0203500 | - | Detail |
| C1H5g06930 | 5:6,712,797-6,717,868 | + | C2H5g29959 | CX5g038655 | LOC_Os05g14300 | Os05g0232500 | - | Detail |
| C1H5g02144 | 5:6,734,138-6,735,825 | + | C2H5g10865 | CX5g041107 | LOC_Os05g14370 | Os05g0571200 | OsWRKY19 | Detail |
| C1H5g21646 | 5:6,825,795-6,851,545 | + | C2H5g07002 | CX5g040240 | LOC_Os05g08810 | Os05g0235300 | OsTOR, TOR | Detail |
| C1H5g11004 | 5:6,855,983-6,856,536 | - | C2H5g24114 | CX5g040852 | LOC_Os05g14580 | Os05g0235701 | - | Detail |
| C1H5g23614 | 5:6,871,322-6,877,810 | + | C2H5g24097 | CX5g041153 | LOC_Os05g14590 | Os05g0235800 | - | Detail |
| C1H5g11422 | 5:6,910,095-6,916,773 | + | C2H5g30498 | CX5g038991 | LOC_Os05g14730 | Os05g0237100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g23211 | 2:23,145,297-23,151,936 | - | C1H2g19949 | CX2g021587 | LOC_Os02g40784 | Os02g0621300 | OsCER1 | Detail |
| C2H2g09937 | 2:23,152,627-23,153,142 | + | C1H2g08472 | - | LOC_Os02g40800 | Os02g0621400 | - | Detail |
| C2H2g26983 | 2:23,156,090-23,160,980 | - | C1H2g27103 | CX2g019928 | LOC_Os02g40810 | Os02g0621500 | - | Detail |
| C2H2g10810 | 2:23,167,190-23,167,666 | - | C1H2g19112 | CX2g022093 | LOC_Os02g40820 | Os02g0621600 | - | Detail |
| C2H2g06529 | 2:23,170,568-23,176,573 | + | C1H2g19508 | CX2g023876 | LOC_Os02g40830 | Os02g0621700 | - | Detail |
| C2H2g19681 | 2:23,178,228-23,183,068 | - | C1H2g14578 | CX2g021578 | LOC_Os02g40840 | Os02g0621800 | HWH1, hwh1 | Detail |
| C2H2g04248 | 2:23,188,235-23,194,293 | + | C1H2g29233 | CX2g024826 | LOC_Os02g40860 | Os02g0622100 | HBD2, OsCKI1, CKI, hbd2, CKI1, LTG1, OsCKI1/LTRPK1 | Detail |
| C2H2g05625 | 2:23,195,382-23,196,287 | - | - | CX2g019843 | LOC_Os02g40870 | Os02g0622200 | - | Detail |
| C2H2g00421 | 2:23,198,682-23,200,023 | - | C1H2g26754 | CX2g020034 | LOC_Os02g40880 | Os02g0622300 | - | Detail |
| C2H2g15374 | 2:23,200,174-23,203,257 | + | C1H2g28817 | CX2g023937 | LOC_Os02g40890 | Os02g0622400 | - | Detail |
| C2H2g11747 | 2:23,204,257-23,207,044 | - | C1H2g19529 | CX2g019570 | LOC_Os02g40900 | Os02g0622500 | - | Detail |
| C2H2g13801 | 2:23,220,062-23,223,732 | + | C1H2g10086 | CX2g020385 | LOC_Os02g41450 | Os02g0623300 | - | Detail |
| C2H2g27172 | 2:23,234,512-23,235,165 | - | C1H2g26908 | CX2g020290 | LOC_Os02g41460 | Os02g0623400 | OsG1L3 | Detail |
| C2H2g23020 | 2:23,254,839-23,266,707 | - | C1H2g09216 | CX2g021983 | LOC_Os02g41470 | Os02g0623500 | - | Detail |
| C2H2g05553 | 2:23,268,111-23,270,971 | + | - | - | - | - | - | Detail |
| C2H2g28960 | 2:23,272,755-23,275,610 | - | C1H2g24692 | CX2g019549 | LOC_Os02g41480 | Os02g0623600 | - | Detail |
| C2H2g23490 | 2:23,282,917-23,283,733 | - | C1H2g28052 | - | LOC_Os02g41490 | - | - | Detail |
| C2H2g09222 | 2:23,285,048-23,287,653 | - | C1H2g10845 | CX2g019549 | LOC_Os02g41500 | Os02g0623932 | - | Detail |
| C2H2g05626 | 2:23,287,677-23,288,111 | - | C1H2g31771 | CX2g019332 | LOC_Os02g41500 | Os02g0624100 | - | Detail |
| C2H2g21291 | 2:23,294,422-23,295,318 | - | C1H2g14607 | CX2g020985 | LOC_Os02g41510 | Os02g0624300 | OsMYB30, OsMYB5P | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |