| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g05423 | 5:5,851,795-5,853,577 | + | C2H5g17939 | CX5g039126 | LOC_Os05g12260 | Os05g0213500 | OsPYL/RCAR5, PYL5, OsPYL5, OsPYL11 | Detail |
| C1H5g09144 | 5:5,868,192-5,868,449 | - | - | - | - | - | - | Detail |
| C1H5g15494 | 5:5,884,164-5,887,559 | - | C2H5g12404 | CX5g040749 | - | Os05g0534400 | OsCBL4 | Detail |
| C1H5g24794 | 5:5,893,422-5,894,835 | + | C2H5g09187 | CX5g039170 | LOC_Os05g12330 | Os05g0214400 | - | Detail |
| C1H5g26911 | 5:5,896,886-5,898,926 | - | C2H5g12113 | CX5g040270 | LOC_Os05g12320 | Os05g0214300 | OsSWEET3a | Detail |
| C1H5g17685 | 5:5,927,132-5,930,690 | + | C2H5g05190 | CX5g039875 | LOC_Os05g12380 | Os05g0214900 | - | Detail |
| C1H5g17388 | 5:5,935,997-5,937,444 | - | C2H5g13227 | CX5g037579 | LOC_Os05g12640 | Os05g0217800 | - | Detail |
| C1H5g04892 | 5:5,939,256-5,940,681 | - | C2H5g13543 | CX5g037579 | LOC_Os05g12410 | Os05g0215066 | - | Detail |
| C1H5g12216 | 5:5,963,540-5,966,205 | + | C2H5g18133 | CX5g036686 | LOC_Os05g12474 | Os05g0215600 | - | Detail |
| C1H5g25924 | 5:5,972,628-5,975,549 | - | C2H5g23788 | CX5g039037 | LOC_Os05g12490 | Os05g0215800 | - | Detail |
| C1H5g07689 | 5:6,018,014-6,021,241 | + | C2H5g19202 | CX5g040114 | LOC_Os05g12570 | Os05g0216950 | - | Detail |
| C1H5g06830 | 5:6,022,207-6,022,719 | + | C2H5g16818 | - | LOC_Os05g12570 | Os05g0216950 | - | Detail |
| C1H5g22482 | 5:6,024,372-6,024,666 | - | C2H5g09670 | CX5g039832 | LOC_Os05g12580 | Os05g0217000 | - | Detail |
| C1H5g16858 | 5:6,036,445-6,037,874 | + | C2H5g28086 | CX5g037579 | LOC_Os05g12410 | Os05g0215066 | - | Detail |
| C1H5g11795 | 5:6,042,188-6,043,748 | + | C2H5g27280 | CX5g037579 | LOC_Os05g12640 | Os05g0217800 | - | Detail |
| C1H5g03954 | 5:6,068,654-6,073,776 | - | C2H5g06114 | CX5g037719 | LOC_Os05g12680 | Os05g0218400 | Z15 | Detail |
| C1H5g03390 | 5:6,083,000-6,083,320 | - | - | CX9g057488 | - | - | - | Detail |
| C1H5g03697 | 5:6,092,778-6,097,874 | - | - | CX5g040396 | - | - | - | Detail |
| C1H5g22560 | 5:6,102,860-6,103,741 | - | C2H5g25358 | CX5g036721 | LOC_Os05g12808 | Os05g0583600 | - | Detail |
| C1H5g01114 | 5:6,121,472-6,127,990 | - | C2H5g11717 | CX5g037462 | LOC_Os05g13300 | Os05g0219800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22623 | 4:21,627,857-21,628,402 | - | - | CX4g032772 | - | - | - | Detail |
| C2H4g18693 | 4:21,633,822-21,635,195 | - | - | CX4g032139 | LOC_Os04g42310 | Os04g0501500 | - | Detail |
| C2H4g30574 | 4:21,638,433-21,642,926 | - | C1H4g13362 | CX4g034319 | LOC_Os04g55960 | Os04g0653400 | - | Detail |
| C2H4g27535 | 4:21,648,647-21,655,605 | - | C1H4g15554 | CX4g035234 | LOC_Os04g42320 | Os04g0501600 | - | Detail |
| C2H4g15764 | 4:21,658,127-21,664,301 | + | C1H4g01323 | CX4g034189 | LOC_Os04g42330 | Os04g0501700 | - | Detail |
| C2H4g27962 | 4:21,667,888-21,669,934 | + | C1H4g00716 | CX4g032700 | LOC_Os04g42340 | Os04g0501800 | - | Detail |
| C2H4g03735 | 4:21,675,409-21,675,966 | + | - | - | - | - | - | Detail |
| C2H4g27570 | 4:21,676,488-21,678,014 | + | C1H4g29745 | CX4g034230 | LOC_Os04g42360 | Os04g0502100 | - | Detail |
| C2H4g20801 | 4:21,678,671-21,686,370 | + | C1H4g31377 | CX4g031888 | LOC_Os04g42370 | Os04g0502200 | - | Detail |
| C2H4g21349 | 4:21,689,274-21,691,146 | - | C1H4g24462 | CX4g036274 | LOC_Os04g42380 | Os04g0502300 | - | Detail |
| C2H4g03955 | 4:21,703,469-21,705,151 | - | C1H4g11967 | CX4g033311 | LOC_Os04g38960 | Os04g0422950 | - | Detail |
| C2H4g30598 | 4:21,707,078-21,712,115 | + | C1H4g11983 | CX4g032715 | LOC_Os04g42420 | Os04g0502800 | - | Detail |
| C2H4g04819 | 4:21,716,123-21,719,772 | + | C1H4g16599 | CX4g031486 | LOC_Os04g42430 | Os04g0502900 | - | Detail |
| C2H4g05363 | 4:21,722,307-21,723,471 | - | C1H4g04634 | CX4g033315 | LOC_Os04g42451 | Os04g0503200 | - | Detail |
| C2H4g02561 | 4:21,726,938-21,734,388 | - | C1H4g07491 | CX4g032749 | LOC_Os04g42470 | Os04g0503500 | - | Detail |
| C2H4g28080 | 4:21,738,111-21,742,734 | + | C1H4g19134 | CX4g035672 | LOC_Os04g42480 | Os04g0503600 | - | Detail |
| C2H4g16392 | 4:21,741,137-21,747,086 | - | C1H4g08101 | CX4g031420 | LOC_Os04g42490 | Os04g0503700 | - | Detail |
| C2H4g21715 | 4:21,747,800-21,749,408 | + | C1H4g13232 | CX4g031722 | LOC_Os04g42500 | Os04g0503800 | - | Detail |
| C2H4g27111 | 4:21,761,830-21,766,535 | + | C1H4g30274 | CX4g036077 | LOC_Os04g42520 | Os04g0504000 | OsAPT2 | Detail |
| C2H4g06227 | 4:21,769,126-21,769,786 | - | C1H4g12187 | CX4g032902 | LOC_Os04g42540 | Os04g0504200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |