| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g05423 | 5:5,851,795-5,853,577 | + | C2H5g17939 | CX5g039126 | LOC_Os05g12260 | Os05g0213500 | OsPYL/RCAR5, PYL5, OsPYL5, OsPYL11 | Detail |
| C1H5g09144 | 5:5,868,192-5,868,449 | - | - | - | - | - | - | Detail |
| C1H5g15494 | 5:5,884,164-5,887,559 | - | C2H5g12404 | CX5g040749 | - | Os05g0534400 | OsCBL4 | Detail |
| C1H5g24794 | 5:5,893,422-5,894,835 | + | C2H5g09187 | CX5g039170 | LOC_Os05g12330 | Os05g0214400 | - | Detail |
| C1H5g26911 | 5:5,896,886-5,898,926 | - | C2H5g12113 | CX5g040270 | LOC_Os05g12320 | Os05g0214300 | OsSWEET3a | Detail |
| C1H5g17685 | 5:5,927,132-5,930,690 | + | C2H5g05190 | CX5g039875 | LOC_Os05g12380 | Os05g0214900 | - | Detail |
| C1H5g17388 | 5:5,935,997-5,937,444 | - | C2H5g13227 | CX5g037579 | LOC_Os05g12640 | Os05g0217800 | - | Detail |
| C1H5g04892 | 5:5,939,256-5,940,681 | - | C2H5g13543 | CX5g037579 | LOC_Os05g12410 | Os05g0215066 | - | Detail |
| C1H5g12216 | 5:5,963,540-5,966,205 | + | C2H5g18133 | CX5g036686 | LOC_Os05g12474 | Os05g0215600 | - | Detail |
| C1H5g25924 | 5:5,972,628-5,975,549 | - | C2H5g23788 | CX5g039037 | LOC_Os05g12490 | Os05g0215800 | - | Detail |
| C1H5g07689 | 5:6,018,014-6,021,241 | + | C2H5g19202 | CX5g040114 | LOC_Os05g12570 | Os05g0216950 | - | Detail |
| C1H5g06830 | 5:6,022,207-6,022,719 | + | C2H5g16818 | - | LOC_Os05g12570 | Os05g0216950 | - | Detail |
| C1H5g22482 | 5:6,024,372-6,024,666 | - | C2H5g09670 | CX5g039832 | LOC_Os05g12580 | Os05g0217000 | - | Detail |
| C1H5g16858 | 5:6,036,445-6,037,874 | + | C2H5g28086 | CX5g037579 | LOC_Os05g12410 | Os05g0215066 | - | Detail |
| C1H5g11795 | 5:6,042,188-6,043,748 | + | C2H5g27280 | CX5g037579 | LOC_Os05g12640 | Os05g0217800 | - | Detail |
| C1H5g03954 | 5:6,068,654-6,073,776 | - | C2H5g06114 | CX5g037719 | LOC_Os05g12680 | Os05g0218400 | Z15 | Detail |
| C1H5g03390 | 5:6,083,000-6,083,320 | - | - | CX9g057488 | - | - | - | Detail |
| C1H5g03697 | 5:6,092,778-6,097,874 | - | - | CX5g040396 | - | - | - | Detail |
| C1H5g22560 | 5:6,102,860-6,103,741 | - | C2H5g25358 | CX5g036721 | LOC_Os05g12808 | Os05g0583600 | - | Detail |
| C1H5g01114 | 5:6,121,472-6,127,990 | - | C2H5g11717 | CX5g037462 | LOC_Os05g13300 | Os05g0219800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g00544 | 9:14,073,583-14,075,833 | + | C1H9g27006 | CX9g057956 | LOC_Os09g27620 | Os09g0449000 | OsMS1, PTC1 | Detail |
| C2H9g07425 | 9:14,112,330-14,115,612 | + | C1H9g01763 | CX9g054902 | LOC_Os09g27650 | Os09g0449400 | IDD13 | Detail |
| C2H9g06801 | 9:14,120,929-14,122,089 | + | C1H9g25929 | CX9g058036 | LOC_Os09g27660 | Os09g0449500 | - | Detail |
| C2H9g00964 | 9:14,124,597-14,127,998 | + | C1H9g24951 | CX9g055092 | LOC_Os09g27570 | Os09g0449600 | - | Detail |
| C2H9g26524 | 9:14,138,764-14,141,002 | + | C1H9g21509 | CX9g056221 | LOC_Os09g27680 | Os09g0449800 | - | Detail |
| C2H9g13669 | 9:14,145,121-14,146,572 | + | C1H9g08384 | CX9g058164 | LOC_Os09g27690 | Os09g0450200 | - | Detail |
| C2H9g25772 | 9:14,148,025-14,153,537 | - | C1H9g06430 | CX9g057479 | LOC_Os09g27700 | Os09g0450300 | - | Detail |
| C2H9g17119 | 9:14,168,109-14,169,320 | + | C1H9g22970 | CX9g057225 | LOC_Os09g27730 | Os09g0450600 | - | Detail |
| C2H9g24868 | 9:14,170,936-14,172,042 | - | C1H9g31330 | CX9g057122 | LOC_Os09g27750 | Os09g0451000 | ACO1, OsACO1, ACO | Detail |
| C2H9g13280 | 9:14,185,610-14,187,162 | + | C1H9g25747 | CX9g055115 | LOC_Os09g27820 | Os09g0451400 | ACO2, OsACO2 | Detail |
| C2H9g08067 | 9:14,192,051-14,196,963 | + | C1H9g11732 | CX9g057921 | LOC_Os09g27830 | Os09g0451500 | PDIL2;3 | Detail |
| C2H9g21782 | 9:14,214,240-14,218,489 | + | C1H9g05298 | CX9g054952 | LOC_Os09g27890 | Os09g0452200 | - | Detail |
| C2H9g02569 | 9:14,222,638-14,225,392 | + | - | - | LOC_Os09g27930 | Os09g0568400 | - | Detail |
| C2H9g03912 | 9:14,230,396-14,233,757 | - | C1H9g30352 | CX9g056293 | LOC_Os09g27950 | Os09g0452900 | - | Detail |
| C2H9g02612 | 9:14,236,882-14,239,760 | - | C1H9g28680 | CX9g056150 | LOC_Os09g27960 | Os09g0453000 | - | Detail |
| C2H9g04673 | 9:14,240,854-14,242,483 | + | C1H9g19635 | CX9g056673 | LOC_Os09g27980 | Os09g0453200 | - | Detail |
| C2H9g04521 | 9:14,242,771-14,244,153 | - | C1H9g20707 | CX9g056708 | LOC_Os09g27990 | Os09g0453300 | - | Detail |
| C2H9g02229 | 9:14,246,414-14,249,015 | - | C1H9g05527 | CX9g055145 | LOC_Os09g28000 | Os09g0453400 | - | Detail |
| C2H9g02526 | 9:14,252,080-14,256,551 | - | C1H9g19567 | CX9g057106 | LOC_Os09g28019 | Os09g0453500 | - | Detail |
| C2H9g18876 | 9:14,258,684-14,266,141 | - | C1H9g02119 | CX9g056994 | LOC_Os09g28040 | Os09g0453700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |