| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g26903 | 5:5,158,228-5,159,846 | + | C2H5g11472 | - | LOC_Os01g02490 | Os01g0115100 | - | Detail |
| C1H5g01964 | 5:5,166,370-5,166,918 | - | - | CX5g039898 | - | - | - | Detail |
| C1H5g10110 | 5:5,167,201-5,170,063 | + | C2H5g26149 | CX5g038757 | LOC_Os05g14440 | - | - | Detail |
| C1H5g23060 | 5:5,172,013-5,172,629 | - | - | - | - | - | - | Detail |
| C1H5g18473 | 5:5,228,461-5,229,666 | + | C2H5g03949 | - | LOC_Os05g11320 | Os05g0202800 | - | Detail |
| C1H5g07479 | 5:5,246,224-5,248,831 | - | C2H5g10422 | - | LOC_Os05g11414 | Os05g0203800 | MADS58, OsMADS58 | Detail |
| C1H5g28755 | 5:5,253,353-5,254,504 | - | C2H5g08779 | CX5g037692 | LOC_Os05g11414 | Os05g0203800 | MADS58, OsMADS58 | Detail |
| C1H5g03480 | 5:5,273,926-5,280,383 | - | C2H5g20110 | CX5g038459 | LOC_Os05g11428 | Os05g0203900 | - | Detail |
| C1H5g20093 | 5:5,282,339-5,282,815 | - | C2H5g21838 | CX5g039849 | - | - | - | Detail |
| C1H5g10517 | 5:5,296,954-5,297,325 | - | C2H5g22266 | CX5g040509 | - | Os05g0204163 | - | Detail |
| C1H5g13043 | 5:5,311,878-5,315,945 | + | C2H5g27150 | CX5g039095 | LOC_Os05g11510 | Os05g0204600 | OsBBX14, OsDBB3b | Detail |
| C1H5g18115 | 5:5,320,072-5,327,792 | + | C2H5g26826 | CX5g038135 | LOC_Os05g11550 | Os05g0204900 | - | Detail |
| C1H5g26208 | 5:5,328,588-5,333,479 | - | C2H5g00147 | CX5g037237 | LOC_Os05g11560 | Os05g0205050 | - | Detail |
| C1H5g00364 | 5:5,399,178-5,400,912 | + | C2H5g19039 | - | LOC_Os05g11630 | Os05g0206200 | - | Detail |
| C1H5g27296 | 5:5,412,174-5,413,622 | - | C2H5g28431 | CX5g037069 | LOC_Os05g11650 | - | - | Detail |
| C1H5g17582 | 5:5,452,405-5,455,452 | - | C2H5g29298 | CX5g040567 | LOC_Os05g11720 | Os05g0207400 | - | Detail |
| C1H5g05386 | 5:5,457,845-5,461,904 | - | C2H5g03783 | CX5g040833 | LOC_Os05g11730 | Os05g0207500 | GSK2, Os GSK2, OsGSK2, Os BIN2, OsBIN2 | Detail |
| C1H5g05946 | 5:5,467,425-5,471,432 | - | C2H5g17868 | CX5g039805 | LOC_Os05g11750 | Os05g0207700 | - | Detail |
| C1H5g22540 | 5:5,482,238-5,495,858 | + | C2H5g16919 | CX5g040662 | LOC_Os05g11770 | Os05g0207900 | - | Detail |
| C1H5g04526 | 5:5,501,925-5,505,833 | + | C2H5g18196 | CX5g037855 | LOC_Os05g11780 | Os05g0208000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01936 | 3:18,769,849-18,770,589 | - | C1H3g06313 | CX3g026822 | LOC_Os03g36650 | Os03g0564600 | - | Detail |
| C2H3g24254 | 3:18,798,461-18,799,456 | - | C1H3g28639 | CX3g030746 | LOC_Os03g36730 | Os03g0565100 | - | Detail |
| C2H3g16341 | 3:18,812,999-18,820,150 | + | C1H3g02915 | CX3g030180 | LOC_Os03g36750 | Os03g0565200 | - | Detail |
| C2H3g09325 | 3:18,822,889-18,827,425 | + | C1H3g22618 | CX3g025334 | LOC_Os03g36760 | Os03g0565300 | - | Detail |
| C2H3g16767 | 3:18,836,422-18,851,133 | + | C1H3g29496 | CX3g030739 | LOC_Os03g36780 | Os03g0565500 | - | Detail |
| C2H3g12114 | 3:18,854,343-18,859,940 | - | C1H3g13363 | CX3g029595 | LOC_Os03g36790 | Os03g0565600 | - | Detail |
| C2H3g20304 | 3:18,869,325-18,872,133 | - | C1H3g22145 | CX3g027738 | LOC_Os03g36830 | Os03g0565900 | - | Detail |
| C2H3g02382 | 3:18,901,233-18,905,222 | - | C1H3g03992 | CX3g027468 | LOC_Os03g36900 | Os03g0566500 | - | Detail |
| C2H3g13499 | 3:18,909,738-18,912,065 | + | C1H3g30925 | CX3g026657 | LOC_Os03g36910 | Os03g0566600 | - | Detail |
| C2H3g26454 | 3:18,912,799-18,916,071 | - | C1H3g18058 | CX3g025200 | LOC_Os03g36920 | Os03g0566700 | - | Detail |
| C2H3g29578 | 3:18,917,243-18,921,727 | - | C1H3g23101 | CX3g027874 | LOC_Os03g36930 | Os03g0566800 | OsRH34 | Detail |
| C2H3g07333 | 3:18,939,378-18,943,165 | - | C1H3g16061 | CX3g026662 | LOC_Os03g37010 | Os03g0567600 | - | Detail |
| C2H3g10852 | 3:18,958,051-18,961,075 | + | C1H3g23205 | CX3g029436 | LOC_Os03g37070 | Os03g0850200 | - | Detail |
| C2H3g20404 | 3:18,965,339-18,967,301 | + | C1H3g08263 | CX3g025716 | LOC_Os03g37080 | Os03g0568400 | - | Detail |
| C2H3g17716 | 3:18,967,920-18,970,629 | - | C1H3g01309 | CX3g029847 | LOC_Os03g37090 | Os03g0568500 | - | Detail |
| C2H3g18006 | 3:18,973,715-18,975,205 | + | C1H3g18739 | CX3g026252 | LOC_Os03g37100 | Os03g0568600 | - | Detail |
| C2H3g16322 | 3:18,980,226-18,982,859 | + | C1H3g05688 | CX3g027192 | LOC_Os03g37120 | Os03g0568800 | - | Detail |
| C2H3g06254 | 3:18,983,206-18,988,369 | - | C1H3g03504 | CX3g029489 | LOC_Os03g37130 | Os03g0568900 | - | Detail |
| C2H3g17441 | 3:18,997,158-19,001,482 | - | C1H3g26605 | CX3g025311 | LOC_Os03g37140 | Os03g0569000 | - | Detail |
| C2H3g20952 | 3:19,017,161-19,018,262 | - | C1H3g17254 | CX3g030124 | LOC_Os03g37250 | Os03g0371800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |