| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g26903 | 5:5,158,228-5,159,846 | + | C2H5g11472 | - | LOC_Os01g02490 | Os01g0115100 | - | Detail |
| C1H5g01964 | 5:5,166,370-5,166,918 | - | - | CX5g039898 | - | - | - | Detail |
| C1H5g10110 | 5:5,167,201-5,170,063 | + | C2H5g26149 | CX5g038757 | LOC_Os05g14440 | - | - | Detail |
| C1H5g23060 | 5:5,172,013-5,172,629 | - | - | - | - | - | - | Detail |
| C1H5g18473 | 5:5,228,461-5,229,666 | + | C2H5g03949 | - | LOC_Os05g11320 | Os05g0202800 | - | Detail |
| C1H5g07479 | 5:5,246,224-5,248,831 | - | C2H5g10422 | - | LOC_Os05g11414 | Os05g0203800 | MADS58, OsMADS58 | Detail |
| C1H5g28755 | 5:5,253,353-5,254,504 | - | C2H5g08779 | CX5g037692 | LOC_Os05g11414 | Os05g0203800 | MADS58, OsMADS58 | Detail |
| C1H5g03480 | 5:5,273,926-5,280,383 | - | C2H5g20110 | CX5g038459 | LOC_Os05g11428 | Os05g0203900 | - | Detail |
| C1H5g20093 | 5:5,282,339-5,282,815 | - | C2H5g21838 | CX5g039849 | - | - | - | Detail |
| C1H5g10517 | 5:5,296,954-5,297,325 | - | C2H5g22266 | CX5g040509 | - | Os05g0204163 | - | Detail |
| C1H5g13043 | 5:5,311,878-5,315,945 | + | C2H5g27150 | CX5g039095 | LOC_Os05g11510 | Os05g0204600 | OsBBX14, OsDBB3b | Detail |
| C1H5g18115 | 5:5,320,072-5,327,792 | + | C2H5g26826 | CX5g038135 | LOC_Os05g11550 | Os05g0204900 | - | Detail |
| C1H5g26208 | 5:5,328,588-5,333,479 | - | C2H5g00147 | CX5g037237 | LOC_Os05g11560 | Os05g0205050 | - | Detail |
| C1H5g00364 | 5:5,399,178-5,400,912 | + | C2H5g19039 | - | LOC_Os05g11630 | Os05g0206200 | - | Detail |
| C1H5g27296 | 5:5,412,174-5,413,622 | - | C2H5g28431 | CX5g037069 | LOC_Os05g11650 | - | - | Detail |
| C1H5g17582 | 5:5,452,405-5,455,452 | - | C2H5g29298 | CX5g040567 | LOC_Os05g11720 | Os05g0207400 | - | Detail |
| C1H5g05386 | 5:5,457,845-5,461,904 | - | C2H5g03783 | CX5g040833 | LOC_Os05g11730 | Os05g0207500 | GSK2, Os GSK2, OsGSK2, Os BIN2, OsBIN2 | Detail |
| C1H5g05946 | 5:5,467,425-5,471,432 | - | C2H5g17868 | CX5g039805 | LOC_Os05g11750 | Os05g0207700 | - | Detail |
| C1H5g22540 | 5:5,482,238-5,495,858 | + | C2H5g16919 | CX5g040662 | LOC_Os05g11770 | Os05g0207900 | - | Detail |
| C1H5g04526 | 5:5,501,925-5,505,833 | + | C2H5g18196 | CX5g037855 | LOC_Os05g11780 | Os05g0208000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g18390 | 10:5,921,674-5,924,022 | - | - | - | LOC_Os10g12290 | - | - | Detail |
| C2H10g29433 | 10:5,949,788-5,950,352 | - | C1H10g01864 | CX10g007934 | - | - | - | Detail |
| C2H10g05884 | 10:5,960,812-5,961,363 | + | - | - | - | - | - | Detail |
| C2H10g12760 | 10:5,963,623-5,972,000 | + | C1H10g20401 | CX10g008211 | LOC_Os10g12354 | Os10g0198600 | - | Detail |
| C2H10g08144 | 10:5,988,232-5,988,675 | + | C1H10g01235 | CX10g008453 | LOC_Os10g12500 | Os10g0198900 | - | Detail |
| C2H10g01655 | 10:5,993,659-5,994,825 | + | C1H10g02252 | CX10g009917 | LOC_Os10g12400 | Os10g0198900 | - | Detail |
| C2H10g25312 | 10:6,020,831-6,021,229 | - | - | - | - | - | - | Detail |
| C2H10g26796 | 10:6,035,491-6,041,863 | + | C1H10g01235 | CX10g008453 | LOC_Os10g12500 | Os10g0199500 | - | Detail |
| C2H10g05229 | 10:6,106,223-6,107,811 | - | C1H10g01735 | - | LOC_Os10g12620 | Os10g0200000 | - | Detail |
| C2H10g22811 | 10:6,109,700-6,110,229 | - | C1H10g29131 | CX10g007957 | LOC_Os10g12620 | Os10g0200000 | - | Detail |
| C2H10g04974 | 10:6,115,134-6,117,217 | - | C1H10g29131 | CX10g007957 | LOC_Os10g12620 | Os10g0200000 | - | Detail |
| C2H10g00216 | 10:6,137,462-6,138,412 | - | C1H10g19966 | CX10g008433 | LOC_Os10g12750 | Os10g0200700 | - | Detail |
| C2H10g19551 | 10:6,143,838-6,151,745 | - | C1H10g04531 | CX3g026791 | LOC_Os10g12760 | Os10g0200800 | - | Detail |
| C2H10g13609 | 10:6,244,253-6,248,260 | - | C1H10g11488 | CX10g008694 | LOC_Os10g13550 | Os10g0203000 | - | Detail |
| C2H10g00885 | 10:6,250,800-6,251,028 | - | C1H10g23040 | CX10g010389 | - | Os10g0203100 | - | Detail |
| C2H10g16939 | 10:6,251,410-6,251,798 | - | C1H10g21349 | CX10g010389 | LOC_Os10g13560 | Os10g0203100 | - | Detail |
| C2H10g25251 | 10:6,301,404-6,311,632 | + | C1H10g17925 | - | LOC_Os10g13630 | Os10g0203600 | - | Detail |
| C2H10g11498 | 10:6,365,044-6,369,996 | - | C1H10g06130 | CX10g010415 | LOC_Os10g13670 | Os10g0204100 | - | Detail |
| C2H10g20596 | 10:6,386,851-6,392,063 | - | C1H10g19332 | CX10g007892 | LOC_Os10g13700 | Os10g0204400 | - | Detail |
| C2H10g24960 | 10:6,461,485-6,462,152 | + | C1H10g18083 | CX10g008621 | LOC_Os10g13800 | Os10g0205200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |