| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g18398 | 5:4,105,017-4,109,120 | + | C2H5g11480 | CX5g037016 | LOC_Os05g08960 | Os05g0182500 | - | Detail |
| C1H5g07949 | 5:4,109,874-4,115,446 | + | C2H5g27795 | CX5g038948 | LOC_Os05g08970 | Os05g0182600 | - | Detail |
| C1H5g02741 | 5:4,117,676-4,122,690 | + | C2H5g12653 | CX5g038774 | LOC_Os05g08980 | Os05g0182700 | - | Detail |
| C1H5g31761 | 5:4,123,425-4,128,459 | - | C2H5g24936 | CX5g038370 | LOC_Os05g08990 | Os05g0182800 | - | Detail |
| C1H5g15058 | 5:4,131,028-4,134,251 | - | C2H5g16852 | CX5g038370 | LOC_Os05g09000 | Os05g0182900 | - | Detail |
| C1H5g08045 | 5:4,139,611-4,140,737 | - | C2H5g21678 | CX5g036910 | LOC_Os05g09020 | Os05g0183100 | OsWRKY67 | Detail |
| C1H5g24536 | 5:4,153,586-4,157,274 | - | C2H5g08140 | CX5g039532 | LOC_Os05g09050 | Os05g0183300 | OsMLO12 | Detail |
| C1H5g06520 | 5:4,157,468-4,158,376 | - | C2H5g18635 | CX5g037375 | - | Os05g0183300 | OsMLO12 | Detail |
| C1H5g06253 | 5:4,186,575-4,188,026 | + | C2H5g23393 | CX5g039725 | LOC_Os05g09150 | Os05g0183900 | - | Detail |
| C1H5g08022 | 5:4,203,737-4,204,213 | + | C2H5g21425 | CX5g039725 | LOC_Os05g09240 | Os05g0184500 | - | Detail |
| C1H5g00334 | 5:4,220,060-4,220,622 | - | C2H5g09509 | - | - | - | - | Detail |
| C1H5g14479 | 5:4,222,831-4,224,267 | - | C2H5g17497 | CX5g040488 | LOC_Os05g09280 | Os05g0184901 | - | Detail |
| C1H5g18334 | 5:4,247,914-4,259,948 | + | C2H5g02956 | CX5g041051 | LOC_Os05g09360 | Os05g0185650 | - | Detail |
| C1H5g09420 | 5:4,265,465-4,269,928 | - | C2H5g29013 | CX5g037169 | LOC_Os05g09370 | - | - | Detail |
| C1H5g18900 | 5:4,271,867-4,273,109 | - | C2H5g25713 | CX5g038482 | - | Os05g0185700 | - | Detail |
| C1H5g05974 | 5:4,274,908-4,278,681 | + | C2H5g18224 | CX5g038289 | LOC_Os05g09380 | Os05g0185800 | - | Detail |
| C1H5g28043 | 5:4,281,504-4,282,215 | - | C2H5g05596 | CX5g040038 | LOC_Os05g09400 | Os05g0186000 | - | Detail |
| C1H5g30722 | 5:4,283,067-4,285,046 | - | C2H5g21372 | CX5g037460 | LOC_Os05g09410 | Os05g0186100 | - | Detail |
| C1H5g29951 | 5:4,296,225-4,299,362 | - | C2H5g01818 | CX5g040773 | LOC_Os05g09440 | Os05g0186300 | OscytME2 | Detail |
| C1H5g15338 | 5:4,326,778-4,327,958 | + | C2H5g14302 | CX5g038771 | LOC_Os05g09480 | Os05g0186900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g13914 | 3:766,991-768,743 | + | C1H3g12831 | CX3g029190 | LOC_Os03g02600 | Os03g0117200 | - | Detail |
| C2H3g10644 | 3:770,486-771,430 | + | C1H3g08482 | CX3g030477 | LOC_Os03g02610 | Os03g0117300 | - | Detail |
| C2H3g09711 | 3:772,427-776,196 | + | C1H3g14052 | CX3g025697 | LOC_Os03g02640 | Os03g0117800 | - | Detail |
| C2H3g30074 | 3:776,701-777,315 | + | C1H3g27090 | CX3g029231 | LOC_Os03g05590 | Os03g0117900 | - | Detail |
| C2H3g15234 | 3:781,622-785,586 | + | C1H3g15880 | CX3g029442 | LOC_Os03g02660 | Os03g0118100 | - | Detail |
| C2H3g07784 | 3:787,968-790,946 | + | C1H3g16233 | CX3g026262 | LOC_Os03g02670 | Os03g0118200 | - | Detail |
| C2H3g27804 | 3:794,202-797,684 | + | C1H3g13017 | CX3g031203 | LOC_Os03g02680 | Os03g0118400 | - | Detail |
| C2H3g24680 | 3:799,546-804,409 | + | C1H3g16154 | CX3g030967 | LOC_Os03g02685 | Os03g0118600 | - | Detail |
| C2H3g19778 | 3:805,523-807,094 | + | C1H3g29819 | CX3g029478 | LOC_Os03g02700 | Os03g0118700 | - | Detail |
| C2H3g28799 | 3:807,142-807,898 | + | C1H3g15623 | CX3g029478 | LOC_Os03g02700 | Os03g0118700 | - | Detail |
| C2H3g12379 | 3:811,638-816,716 | + | C1H3g19576 | CX3g027174 | LOC_Os03g02710 | Os03g0118800 | - | Detail |
| C2H3g28095 | 3:817,918-821,033 | + | C1H3g18152 | CX3g029720 | LOC_Os03g02720 | Os03g0118900 | - | Detail |
| C2H3g05533 | 3:821,452-823,335 | - | C1H3g09297 | CX3g029588 | LOC_Os03g02730 | Os03g0119000 | - | Detail |
| C2H3g14532 | 3:824,118-828,190 | - | C1H3g07728 | CX3g029171 | LOC_Os03g02740 | Os03g0119100 | - | Detail |
| C2H3g09524 | 3:830,910-833,162 | - | C1H3g23288 | CX3g030706 | LOC_Os03g02750 | Os03g0119300 | - | Detail |
| C2H3g14318 | 3:836,263-838,050 | + | - | - | - | - | - | Detail |
| C2H3g19502 | 3:853,357-881,954 | + | C1H3g00618 | CX3g030646 | LOC_Os03g03610 | Os03g0119500 | CRR1 | Detail |
| C2H3g11241 | 3:882,716-883,975 | + | C1H3g23255 | CX3g025079 | LOC_Os03g02762 | Os03g0119700 | - | Detail |
| C2H3g05811 | 3:887,426-887,737 | + | C1H3g13459 | CX3g028433 | LOC_Os03g02780 | Os03g0119900 | - | Detail |
| C2H3g00993 | 3:896,744-900,693 | + | C1H3g04574 | CX3g026456 | LOC_Os03g02800 | Os03g0119966 | RIM1, ONAC054, ONAC54, NAC54 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |