| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g11504 | 5:3,649,274-3,649,921 | + | C2H5g21158 | CX5g039717 | LOC_Os05g07890 | Os05g0171200 | - | Detail |
| C1H5g14842 | 5:3,653,044-3,656,701 | + | C2H5g11975 | CX5g038572 | LOC_Os05g07900 | Os05g0171300 | - | Detail |
| C1H5g05810 | 5:3,669,433-3,674,100 | + | C2H5g28875 | CX5g040454 | LOC_Os05g07940 | Os05g0171900 | - | Detail |
| C1H5g06487 | 5:3,679,246-3,680,409 | - | C2H5g13205 | CX5g040831 | LOC_Os05g08010 | Os05g0172500 | - | Detail |
| C1H5g09811 | 5:3,682,475-3,683,767 | - | C2H5g23308 | CX5g040831 | LOC_Os05g07960 | Os05g0172100 | - | Detail |
| C1H5g28743 | 5:3,687,610-3,692,840 | - | C2H5g03657 | CX5g037090 | LOC_Os05g07980 | Os05g0172300 | - | Detail |
| C1H5g08333 | 5:3,696,830-3,700,752 | - | C2H5g03936 | CX5g038351 | LOC_Os05g08010 | Os05g0172500 | - | Detail |
| C1H5g18279 | 5:3,712,708-3,714,180 | + | - | CX5g038912 | - | - | - | Detail |
| C1H5g27827 | 5:3,717,017-3,719,965 | + | C2H5g07835 | CX5g040996 | LOC_Os05g08360 | Os05g0176000 | - | Detail |
| C1H5g22753 | 5:3,723,671-3,729,931 | - | C2H5g15897 | CX5g038136 | LOC_Os05g08370 | Os05g0176100 | - | Detail |
| C1H5g02275 | 5:3,739,188-3,741,590 | - | C2H5g24531 | CX5g040050 | LOC_Os05g08400 | Os05g0176400 | - | Detail |
| C1H5g15996 | 5:3,743,300-3,746,440 | - | C2H5g15763 | CX5g039063 | LOC_Os05g08410 | Os05g0176500 | - | Detail |
| C1H5g19736 | 5:3,746,652-3,749,108 | + | C2H5g16673 | CX5g039906 | LOC_Os05g08414 | Os05g0176600 | - | Detail |
| C1H5g07740 | 5:3,759,704-3,768,730 | - | C2H5g23491 | CX5g039146 | LOC_Os05g08430 | Os05g0176800 | BOR4, OsBOR4 | Detail |
| C1H5g26361 | 5:3,790,553-3,792,332 | + | C2H5g22969 | CX5g040267 | LOC_Os05g08450 | Os05g0177100 | - | Detail |
| C1H5g11821 | 5:3,800,983-3,803,223 | - | C2H5g14876 | CX5g040267 | LOC_Os05g08460 | Os05g0177400 | - | Detail |
| C1H5g18386 | 5:3,803,309-3,803,629 | - | C2H5g00540 | - | - | - | - | Detail |
| C1H5g12562 | 5:3,812,648-3,816,213 | + | C2H5g23095 | CX5g040475 | LOC_Os05g08490 | Os05g0177800 | - | Detail |
| C1H5g05273 | 5:3,823,371-3,828,084 | + | C2H5g03109 | CX5g039674 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| C1H5g26746 | 5:3,830,915-3,831,382 | - | C2H5g08820 | CX5g040319 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g13009 | 6:6,336,370-6,338,406 | - | C1H6g20998 | CX6g042642 | LOC_Os06g13550 | Os06g0243801 | - | Detail |
| C2H6g28019 | 6:6,341,740-6,350,486 | + | C1H6g11867 | CX6g043857 | LOC_Os06g13570 | Os06g0244100 | - | Detail |
| C2H6g18366 | 6:6,351,663-6,353,950 | - | C1H6g10383 | CX6g045537 | LOC_Os06g13580 | Os06g0244200 | - | Detail |
| C2H6g02596 | 6:6,380,764-6,383,872 | + | C1H6g23945 | CX6g041648 | LOC_Os06g13600 | Os06g0244700 | - | Detail |
| C2H6g25652 | 6:6,390,580-6,390,978 | - | - | - | - | - | - | Detail |
| C2H6g21184 | 6:6,395,506-6,395,823 | - | C1H6g17530 | CX6g045939 | LOC_Os06g03920 | Os06g0129800 | - | Detail |
| C2H6g11999 | 6:6,410,401-6,413,370 | - | C1H6g10314 | CX6g044227 | LOC_Os06g13640 | Os06g0245600 | RPL1 | Detail |
| C2H6g09807 | 6:6,420,111-6,425,597 | - | C1H6g17705 | CX6g043584 | LOC_Os06g13650 | Os06g0245700 | - | Detail |
| C2H6g10274 | 6:6,431,235-6,437,904 | + | C1H6g09414 | CX6g044406 | LOC_Os06g13660 | Os06g0245800 | - | Detail |
| C2H6g18288 | 6:6,441,185-6,443,851 | + | C1H6g19389 | CX2g021394 | LOC_Os06g13670 | Os06g0245900 | OsE2Fe-2 | Detail |
| C2H6g09103 | 6:6,446,047-6,447,391 | - | C1H6g02337 | CX6g044603 | LOC_Os06g13680 | Os06g0246000 | - | Detail |
| C2H6g11249 | 6:6,453,114-6,455,829 | + | C1H6g08415 | CX2g023255 | LOC_Os06g13720 | Os06g0246500 | - | Detail |
| C2H6g04748 | 6:6,471,711-6,472,832 | + | - | CX6g042552 | LOC_Os06g13760 | Os06g0247000 | - | Detail |
| C2H6g22170 | 6:6,485,232-6,490,641 | - | C1H6g07218 | CX6g042091 | LOC_Os06g13810 | Os06g0247500 | - | Detail |
| C2H6g07966 | 6:6,498,036-6,506,921 | + | C1H6g30049 | CX6g044254 | LOC_Os06g13820 | Os06g0247800 | - | Detail |
| C2H6g05734 | 6:6,507,409-6,510,911 | - | C1H6g19090 | CX6g043631 | LOC_Os06g13830 | Os06g0247900 | - | Detail |
| C2H6g12235 | 6:6,539,931-6,540,533 | + | C1H6g00473 | CX6g044796 | LOC_Os06g13839 | Os06g0248200 | - | Detail |
| C2H6g06570 | 6:6,541,216-6,542,797 | - | C1H6g08977 | CX6g045645 | LOC_Os06g13850 | Os06g0250000 | - | Detail |
| C2H6g15689 | 6:6,544,566-6,549,924 | + | C1H6g16301 | CX6g042062 | LOC_Os06g13860 | Os06g0248400 | - | Detail |
| C2H6g04443 | 6:6,555,129-6,556,478 | + | C1H6g15545 | CX6g041945 | LOC_Os06g13870 | Os06g0248500 | OsPUB39 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |