| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06278 | 5:3,513,927-3,517,048 | - | C2H5g26541 | CX5g039037 | LOC_Os05g07670 | Os05g0168700 | - | Detail |
| C1H5g16283 | 5:3,524,901-3,529,947 | - | C2H5g24295 | CX5g041039 | LOC_Os05g07680 | Os05g0168800 | - | Detail |
| C1H5g10099 | 5:3,531,887-3,534,649 | - | C2H5g20659 | CX5g041121 | LOC_Os05g07690 | Os05g0169000 | - | Detail |
| C1H5g10237 | 5:3,538,734-3,539,662 | + | C2H5g10103 | CX5g039173 | LOC_Os05g07700 | Os05g0169100 | - | Detail |
| C1H5g03238 | 5:3,541,864-3,545,322 | + | C2H5g16499 | CX5g038430 | LOC_Os05g07710 | Os05g0169200 | - | Detail |
| C1H5g25376 | 5:3,549,258-3,551,894 | + | C2H5g06689 | CX5g040591 | LOC_Os05g07720 | Os05g0169300 | - | Detail |
| C1H5g20363 | 5:3,556,375-3,560,308 | - | C2H5g00785 | CX5g037386 | LOC_Os05g07730 | Os05g0169400 | - | Detail |
| C1H5g01607 | 5:3,567,660-3,571,897 | + | C2H5g20519 | CX5g038927 | LOC_Os05g07740 | Os05g0169600 | - | Detail |
| C1H5g30978 | 5:3,573,503-3,578,681 | - | C2H5g27992 | CX5g038606 | LOC_Os05g07764 | Os05g0169800 | - | Detail |
| C1H5g10105 | 5:3,584,690-3,589,075 | - | C2H5g25368 | CX5g037959 | LOC_Os05g07790 | Os05g0170000 | - | Detail |
| C1H5g15564 | 5:3,595,276-3,595,545 | + | C2H5g19189 | CX5g038051 | LOC_Os05g07810 | Os05g0170200 | - | Detail |
| C1H5g23801 | 5:3,596,025-3,597,216 | + | C2H5g03494 | CX5g038051 | LOC_Os05g07810 | Os05g0157200 | - | Detail |
| C1H5g14107 | 5:3,602,065-3,604,533 | + | C2H5g17918 | - | LOC_Os05g07820 | - | - | Detail |
| C1H5g31408 | 5:3,604,554-3,607,535 | + | C2H5g13404 | CX5g038227 | LOC_Os05g07820 | Os05g0491400 | - | Detail |
| C1H5g31806 | 5:3,613,577-3,617,618 | - | C2H1g06196 | CX5g040035 | LOC_Os05g07830 | Os05g0170600 | - | Detail |
| C1H5g14028 | 5:3,622,488-3,623,327 | - | C2H5g29301 | CX5g040501 | LOC_Os05g07850 | Os05g0256500 | - | Detail |
| C1H5g09505 | 5:3,626,534-3,631,042 | - | C2H5g01595 | CX5g040501 | LOC_Os05g07850 | Os05g0170700 | - | Detail |
| C1H5g25530 | 5:3,633,892-3,637,171 | - | C2H5g11350 | CX5g040737 | LOC_Os05g07860 | Os05g0170800 | - | Detail |
| C1H5g29779 | 5:3,640,397-3,643,131 | + | C2H5g30238 | CX5g038689 | LOC_Os05g07870 | Os05g0170950 | - | Detail |
| C1H5g04674 | 5:3,644,297-3,647,416 | - | C2H5g16956 | CX5g039607 | LOC_Os05g07880 | Os05g0171000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g12160 | 2:31,977,251-31,978,025 | + | C1H2g03615 | CX2g022485 | LOC_Os02g57350 | Os02g0818900 | - | Detail |
| C2H2g13224 | 2:31,979,150-31,981,186 | + | C1H2g23220 | CX2g022485 | LOC_Os02g57360 | Os02g0819000 | - | Detail |
| C2H2g09349 | 2:32,001,094-32,003,759 | + | C1H2g05057 | CX2g023697 | LOC_Os02g57370 | Os02g0819100 | OsDHHC1 | Detail |
| C2H2g28063 | 2:32,005,507-32,006,402 | + | C1H2g03792 | CX2g018856 | LOC_Os02g53400 | Os02g0819200 | - | Detail |
| C2H2g11888 | 2:32,008,052-32,013,793 | + | C1H2g16081 | CX2g023843 | LOC_Os02g57390 | Os02g0819300 | - | Detail |
| C2H2g23556 | 2:32,014,351-32,019,166 | - | C1H2g29375 | CX2g024818 | LOC_Os02g57400 | Os02g0819400 | LPA1, OsLpa1.3, Oslpa1, Lpa1, OsLpa1 | Detail |
| C2H2g04446 | 2:32,023,238-32,028,227 | - | C1H2g01387 | CX2g019514 | LOC_Os02g57410 | Os02g0819500 | - | Detail |
| C2H2g12705 | 2:32,035,665-32,039,374 | - | C1H2g02066 | CX2g023750 | LOC_Os02g57420 | Os02g0819600 | - | Detail |
| C2H2g21639 | 2:32,044,698-32,045,991 | - | C1H2g26145 | CX2g022484 | LOC_Os02g57430 | Os02g0819700 | - | Detail |
| C2H2g10374 | 2:32,050,031-32,051,323 | + | C1H2g31294 | CX2g022770 | LOC_Os02g57440 | Os02g0819900 | - | Detail |
| C2H2g05211 | 2:32,052,563-32,056,340 | - | C1H2g00613 | CX2g019574 | LOC_Os02g57450 | Os02g0820000 | - | Detail |
| C2H2g09599 | 2:32,059,046-32,062,103 | + | C1H2g21703 | CX2g023170 | LOC_Os02g57460 | Os02g0820200 | - | Detail |
| C2H2g24658 | 2:32,063,046-32,065,515 | - | C1H2g19315 | CX2g020491 | LOC_Os02g57470 | Os02g0820300 | - | Detail |
| C2H2g13909 | 2:32,068,515-32,069,876 | - | C1H2g17511 | CX2g020751 | LOC_Os02g57480 | Os02g0820400 | - | Detail |
| C2H2g13334 | 2:32,073,929-32,074,692 | - | C1H2g27419 | CX2g023897 | LOC_Os02g57490 | Os02g0820500 | DH1, LBD16 | Detail |
| C2H2g23527 | 2:32,076,901-32,079,768 | - | C1H2g06878 | CX2g020258 | LOC_Os02g57500 | Os02g0820600 | - | Detail |
| C2H2g15378 | 2:32,080,502-32,086,118 | + | C1H2g20124 | CX2g019670 | LOC_Os02g57510 | Os02g0820700 | - | Detail |
| C2H2g25697 | 2:32,088,528-32,089,328 | + | C1H2g18462 | CX2g021426 | LOC_Os02g57520 | Os02g0820800 | PTC2 | Detail |
| C2H2g05580 | 2:32,096,925-32,101,365 | + | C1H2g08194 | CX2g022783 | LOC_Os02g57530 | Os02g0820900 | ETR3, ETR3, OsETR3, OS-ETR3, OsETR3a, OsETR3b, OsPK2, PK2, OsERS4 | Detail |
| C2H2g16075 | 2:32,102,265-32,104,185 | - | C1H2g23403 | CX2g023579 | LOC_Os02g57540 | Os02g0821200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |