| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g19006 | 1:22,121,854-22,124,306 | - | C2H1g29487 | CX1g000678 | LOC_Os01g43090 | Os01g0618100 | - | Detail |
| C1H1g27169 | 1:22,127,239-22,132,163 | + | C2H1g23236 | CX1g005980 | LOC_Os01g43100 | Os01g0618200 | - | Detail |
| C1H1g02475 | 1:22,138,953-22,142,640 | - | C2H1g25813 | CX1g006386 | LOC_Os01g43110 | Os01g0618300 | - | Detail |
| C1H1g04496 | 1:22,144,554-22,148,286 | + | C2H1g12742 | CX1g006588 | LOC_Os01g43120 | Os01g0618400 | - | Detail |
| C1H1g16334 | 1:22,148,658-22,151,942 | + | C2H1g17892 | CX1g000664 | LOC_Os01g43130 | Os01g0618500 | - | Detail |
| C1H1g15522 | 1:22,158,160-22,161,843 | + | C2H1g09612 | CX1g003763 | LOC_Os01g43140 | Os01g0618700 | - | Detail |
| C1H1g21837 | 1:22,165,244-22,171,799 | - | C2H1g07623 | CX1g004860 | LOC_Os01g43150 | Os01g0618800 | - | Detail |
| C1H1g10339 | 1:22,178,695-22,181,926 | + | C2H1g03928 | CX1g000234 | LOC_Os01g43160 | Os01g0618900 | - | Detail |
| C1H1g09667 | 1:22,182,167-22,187,554 | - | C2H1g12410 | CX1g004677 | LOC_Os01g43170 | Os01g0619000 | - | Detail |
| C1H1g15080 | 1:22,189,021-22,189,894 | - | C2H1g14322 | CX1g001323 | LOC_Os01g43180 | Os01g0619100 | OsTCL1 | Detail |
| C1H1g17436 | 1:22,194,508-22,201,809 | + | C2H1g00059 | CX1g002128 | LOC_Os01g43220 | Os01g0619800 | - | Detail |
| C1H1g19388 | 1:22,199,772-22,200,764 | - | C2H1g14322 | CX1g001323 | LOC_Os01g43230 | Os01g0619100 | OsTCL1 | Detail |
| C1H1g31852 | 1:22,207,704-22,211,570 | - | C2H1g27084 | CX1g002659 | LOC_Os01g43250 | Os01g0620100 | OsSEH1 | Detail |
| C1H1g28205 | 1:22,214,915-22,216,363 | - | C2H1g09076 | CX1g002901 | LOC_Os01g43270 | Os01g0620800 | - | Detail |
| C1H1g23014 | 1:22,258,628-22,263,041 | - | C2H1g10530 | CX1g003892 | LOC_Os01g43320 | Os01g0621200 | - | Detail |
| C1H1g28187 | 1:22,269,256-22,274,292 | - | C2H1g18065 | CX1g005932 | LOC_Os01g43330 | Os01g0621300 | - | Detail |
| C1H1g03651 | 1:22,292,180-22,295,358 | + | C2H1g26641 | CX1g003367 | - | - | - | Detail |
| C1H1g06752 | 1:22,299,280-22,299,702 | + | C2H1g03621 | CX1g003367 | - | - | - | Detail |
| C1H1g16638 | 1:22,304,244-22,306,746 | - | C2H1g23165 | CX1g003944 | LOC_Os01g43350 | Os01g0621600 | - | Detail |
| C1H1g27348 | 1:22,313,948-22,315,955 | + | C2H1g10395 | CX1g004083 | LOC_Os01g43360 | Os01g0621700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g09001 | 6:2,272,854-2,274,176 | + | C1H6g29479 | CX6g042252 | LOC_Os06g06300 | Os06g0157500 | RFT1, FT-L 3, OsFTL3, FT-L3, RFT | Detail |
| C2H6g08710 | 6:2,283,559-2,284,174 | + | C1H6g06407 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C2H6g23992 | 6:2,285,513-2,285,704 | + | C1H6g09433 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C2H6g09872 | 6:2,295,836-2,296,849 | + | C1H6g29691 | CX6g041455 | LOC_Os06g06330 | Os06g0157800 | - | Detail |
| C2H6g19375 | 6:2,298,392-2,298,872 | + | C1H6g13605 | CX6g043465 | LOC_Os06g06340 | Os06g0157900 | - | Detail |
| C2H6g03223 | 6:2,300,339-2,308,133 | + | C1H6g01052 | CX6g041165 | LOC_Os06g06350 | Os06g0158000 | - | Detail |
| C2H6g20805 | 6:2,310,236-2,313,536 | + | C1H6g08202 | CX6g041162 | LOC_Os06g06360 | Os06g0158100 | OsWRKY93, OsWRKY113 | Detail |
| C2H6g18246 | 6:2,315,896-2,322,693 | + | C1H6g28677 | CX6g044558 | LOC_Os06g06370 | Os06g0158200 | - | Detail |
| C2H6g22243 | 6:2,323,220-2,329,004 | - | C1H6g07185 | CX6g044801 | LOC_Os06g06380 | Os06g0158300 | - | Detail |
| C2H6g03461 | 6:2,331,239-2,335,093 | - | C1H6g00361 | CX6g045279 | LOC_Os06g06390 | Os06g0158400 | - | Detail |
| C2H6g12842 | 6:2,336,571-2,340,132 | - | C1H6g04562 | CX6g044801 | LOC_Os06g06400 | Os06g0158500 | - | Detail |
| C2H6g18686 | 6:2,343,271-2,345,920 | - | C1H6g29953 | CX6g045460 | LOC_Os06g06410 | Os06g0158600 | - | Detail |
| C2H6g03596 | 6:2,346,287-2,348,327 | + | C1H6g03313 | - | LOC_Os06g06420 | Os06g0158700 | - | Detail |
| C2H6g00327 | 6:2,349,466-2,350,395 | + | - | CX6g044562 | LOC_Os06g06430 | Os06g0158800 | - | Detail |
| C2H6g14590 | 6:2,351,239-2,361,917 | - | C1H6g02873 | CX6g041204 | LOC_Os06g06440 | Os06g0158900 | OsMRP15, OsABCC15, OsABCC15/MRP15 | Detail |
| C2H6g19286 | 6:2,385,093-2,388,696 | + | C1H6g15545 | CX6g044205 | LOC_Os06g06450 | Os06g0159400 | - | Detail |
| C2H6g12020 | 6:2,389,673-2,390,618 | - | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160001 | - | Detail |
| C2H6g03704 | 6:2,391,602-2,395,602 | + | C1H6g14833 | CX6g044205 | LOC_Os06g06470 | Os06g0159600 | - | Detail |
| C2H6g15557 | 6:2,395,948-2,397,192 | - | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0159725 | - | Detail |
| C2H6g13339 | 6:2,405,010-2,408,929 | + | C1H6g29654 | CX6g041545 | LOC_Os06g06490 | Os06g0159900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |