| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g19006 | 1:22,121,854-22,124,306 | - | C2H1g29487 | CX1g000678 | LOC_Os01g43090 | Os01g0618100 | - | Detail |
| C1H1g27169 | 1:22,127,239-22,132,163 | + | C2H1g23236 | CX1g005980 | LOC_Os01g43100 | Os01g0618200 | - | Detail |
| C1H1g02475 | 1:22,138,953-22,142,640 | - | C2H1g25813 | CX1g006386 | LOC_Os01g43110 | Os01g0618300 | - | Detail |
| C1H1g04496 | 1:22,144,554-22,148,286 | + | C2H1g12742 | CX1g006588 | LOC_Os01g43120 | Os01g0618400 | - | Detail |
| C1H1g16334 | 1:22,148,658-22,151,942 | + | C2H1g17892 | CX1g000664 | LOC_Os01g43130 | Os01g0618500 | - | Detail |
| C1H1g15522 | 1:22,158,160-22,161,843 | + | C2H1g09612 | CX1g003763 | LOC_Os01g43140 | Os01g0618700 | - | Detail |
| C1H1g21837 | 1:22,165,244-22,171,799 | - | C2H1g07623 | CX1g004860 | LOC_Os01g43150 | Os01g0618800 | - | Detail |
| C1H1g10339 | 1:22,178,695-22,181,926 | + | C2H1g03928 | CX1g000234 | LOC_Os01g43160 | Os01g0618900 | - | Detail |
| C1H1g09667 | 1:22,182,167-22,187,554 | - | C2H1g12410 | CX1g004677 | LOC_Os01g43170 | Os01g0619000 | - | Detail |
| C1H1g15080 | 1:22,189,021-22,189,894 | - | C2H1g14322 | CX1g001323 | LOC_Os01g43180 | Os01g0619100 | OsTCL1 | Detail |
| C1H1g17436 | 1:22,194,508-22,201,809 | + | C2H1g00059 | CX1g002128 | LOC_Os01g43220 | Os01g0619800 | - | Detail |
| C1H1g19388 | 1:22,199,772-22,200,764 | - | C2H1g14322 | CX1g001323 | LOC_Os01g43230 | Os01g0619100 | OsTCL1 | Detail |
| C1H1g31852 | 1:22,207,704-22,211,570 | - | C2H1g27084 | CX1g002659 | LOC_Os01g43250 | Os01g0620100 | OsSEH1 | Detail |
| C1H1g28205 | 1:22,214,915-22,216,363 | - | C2H1g09076 | CX1g002901 | LOC_Os01g43270 | Os01g0620800 | - | Detail |
| C1H1g23014 | 1:22,258,628-22,263,041 | - | C2H1g10530 | CX1g003892 | LOC_Os01g43320 | Os01g0621200 | - | Detail |
| C1H1g28187 | 1:22,269,256-22,274,292 | - | C2H1g18065 | CX1g005932 | LOC_Os01g43330 | Os01g0621300 | - | Detail |
| C1H1g03651 | 1:22,292,180-22,295,358 | + | C2H1g26641 | CX1g003367 | - | - | - | Detail |
| C1H1g06752 | 1:22,299,280-22,299,702 | + | C2H1g03621 | CX1g003367 | - | - | - | Detail |
| C1H1g16638 | 1:22,304,244-22,306,746 | - | C2H1g23165 | CX1g003944 | LOC_Os01g43350 | Os01g0621600 | - | Detail |
| C1H1g27348 | 1:22,313,948-22,315,955 | + | C2H1g10395 | CX1g004083 | LOC_Os01g43360 | Os01g0621700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g29211 | 5:24,773,434-24,778,298 | - | C1H5g20997 | CX5g038490 | LOC_Os05g51560 | Os05g0593800 | - | Detail |
| C2H5g25800 | 5:24,781,493-24,782,926 | - | C1H5g28104 | CX5g040981 | LOC_Os05g51570 | Os05g0593900 | - | Detail |
| C2H5g28633 | 5:24,788,568-24,789,401 | - | C1H5g28669 | CX5g037849 | LOC_Os05g51590 | Os05g0594100 | - | Detail |
| C2H5g27012 | 5:24,791,474-24,795,427 | - | C1H5g07980 | CX5g040080 | LOC_Os05g51610 | Os05g0594200 | OsCAX1b | Detail |
| C2H5g24138 | 5:24,807,669-24,813,399 | - | C1H5g15566 | CX5g038359 | LOC_Os05g51620 | Os05g0594500 | - | Detail |
| C2H5g08909 | 5:24,821,276-24,829,119 | + | C1H5g26110 | CX5g041049 | LOC_Os05g51630 | Os05g0594700 | - | Detail |
| C2H5g25499 | 5:24,830,313-24,834,947 | - | C1H5g09316 | CX5g039720 | LOC_Os05g51640 | Os05g0594800 | - | Detail |
| C2H5g10034 | 5:24,834,804-24,835,256 | + | - | - | - | - | - | Detail |
| C2H5g15674 | 5:24,835,328-24,836,809 | + | C1H5g23946 | - | LOC_Os05g51650 | Os05g0594900 | - | Detail |
| C2H5g18619 | 5:24,837,143-24,837,715 | - | C1H5g07547 | CX5g039507 | LOC_Os05g51660 | Os05g0595000 | - | Detail |
| C2H5g04566 | 5:24,847,706-24,851,120 | + | C1H5g22966 | CX5g037190 | LOC_Os05g51670 | Os05g0595100 | OsUGE1, OsUGE-1, UGE1, UGE-1, BP1 | Detail |
| C2H5g00689 | 5:24,855,205-24,879,340 | + | C1H5g29705 | CX5g037572 | LOC_Os05g51690 | Os05g0595300 | CRCT, NRR, NRRa | Detail |
| C2H5g03425 | 5:24,855,293-24,856,027 | - | C1H5g17200 | CX5g039657 | LOC_Os05g51680 | Os05g0595200 | - | Detail |
| C2H5g25216 | 5:24,879,621-24,882,457 | - | C1H5g10995 | CX5g038125 | LOC_Os05g51700 | Os05g0595400 | - | Detail |
| C2H5g14814 | 5:24,883,294-24,885,392 | - | C1H5g27674 | CX5g041076 | LOC_Os05g51710 | Os05g0595500 | - | Detail |
| C2H5g08054 | 5:24,889,439-24,889,771 | + | C1H6g06805 | CX5g039789 | - | Os05g0429100 | - | Detail |
| C2H5g23094 | 5:24,890,282-24,894,145 | - | C1H5g24835 | CX5g037161 | LOC_Os05g51740 | Os05g0595800 | - | Detail |
| C2H5g15029 | 5:24,896,984-24,897,528 | - | C1H5g11204 | CX5g037472 | LOC_Os05g45954 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C2H5g10878 | 5:24,898,710-24,900,326 | + | C1H5g19628 | CX5g037109 | LOC_Os05g51750 | Os05g0596000 | - | Detail |
| C2H5g03677 | 5:24,902,561-24,903,473 | - | C1H5g15344 | CX5g040213 | LOC_Os05g51754 | Os05g0596200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |