| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06427 | 5:2,991,615-2,997,443 | + | C2H5g19140 | CX5g037159 | LOC_Os05g06670 | Os05g0158600 | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | Detail |
| C1H5g15255 | 5:3,003,341-3,016,934 | + | C2H5g13429 | CX5g040180 | LOC_Os05g06690 | Os05g0159000 | - | Detail |
| C1H5g29215 | 5:3,020,866-3,023,528 | + | C2H5g10674 | CX5g036830 | LOC_Os05g06700 | Os05g0159100 | - | Detail |
| C1H5g24999 | 5:3,024,303-3,028,380 | - | C2H5g18018 | CX5g040661 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| C1H5g19191 | 5:3,030,462-3,037,921 | - | C2H5g19257 | CX5g037735 | LOC_Os05g06720 | Os05g0159300 | DARX1, GELP62 | Detail |
| C1H5g26427 | 5:3,057,170-3,060,791 | + | C2H5g24095 | CX5g036773 | LOC_Os05g06750 | Os05g0160000 | - | Detail |
| C1H5g22506 | 5:3,062,176-3,065,516 | + | C2H5g30095 | CX5g040221 | LOC_Os05g06760 | Os05g0160100 | - | Detail |
| C1H5g10936 | 5:3,070,796-3,071,813 | - | C2H5g06168 | CX5g038772 | LOC_Os05g06780 | Os05g0160300 | - | Detail |
| C1H5g01032 | 5:3,079,237-3,086,416 | + | C2H5g24726 | CX5g039426 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| C1H5g16939 | 5:3,114,826-3,119,380 | - | C2H5g04837 | CX5g039426 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| C1H5g08386 | 5:3,121,261-3,124,469 | - | C2H5g14563 | CX5g038917 | LOC_Os05g06814 | Os05g0161400 | - | Detail |
| C1H5g11456 | 5:3,134,137-3,138,736 | + | C2H5g12914 | CX5g036690 | LOC_Os05g06840 | Os05g0160800 | - | Detail |
| C1H5g17757 | 5:3,148,121-3,151,561 | + | C2H5g20736 | - | LOC_Os05g06890 | Os05g0161200 | OsCRSH1 | Detail |
| C1H5g28932 | 5:3,156,121-3,159,136 | + | C2H5g07576 | CX5g039426 | LOC_Os05g06910 | Os05g0161400 | - | Detail |
| C1H5g14109 | 5:3,169,114-3,169,720 | + | - | - | - | - | - | Detail |
| C1H5g24444 | 5:3,170,545-3,173,020 | + | C2H5g24440 | - | LOC_Os05g06920 | Os05g0161500 | OsCRSH2 | Detail |
| C1H5g10245 | 5:3,182,963-3,185,281 | + | C2H5g21538 | - | LOC_Os05g06940 | Os05g0161800 | OsCRSH3 | Detail |
| C1H5g04552 | 5:3,194,365-3,196,462 | - | C2H5g10505 | CX5g038822 | LOC_Os05g06970 | Os05g0162000 | - | Detail |
| C1H5g19592 | 5:3,201,093-3,211,946 | - | C2H5g18624 | CX5g040374 | LOC_Os05g06980 | Os05g0162200 | - | Detail |
| C1H5g00882 | 5:3,225,916-3,228,865 | - | C2H5g07564 | CX5g040436 | LOC_Os05g07000 | Os05g0162600 | OsRS2Z39 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g04117 | 11:25,151,878-25,157,906 | - | C1H11g06437 | CX11g011330 | LOC_Os11g47830 | Os11g0704700 | OsSCL57 | Detail |
| C2H11g04648 | 11:25,159,018-25,162,518 | - | C1H11g06897 | CX11g011248 | LOC_Os11g47840 | Os11g0704800 | - | Detail |
| C2H11g28049 | 11:25,171,874-25,173,955 | + | C1H11g04659 | CX11g011294 | LOC_Os11g47870 | Os11g0705200 | - | Detail |
| C2H11g20423 | 11:25,182,221-25,184,128 | + | C1H11g04659 | CX11g011294 | LOC_Os11g47900 | Os11g0705900 | - | Detail |
| C2H11g29649 | 11:25,201,149-25,202,930 | + | C1H11g04659 | CX11g011294 | LOC_Os11g47920 | Os11g0706200 | DHD1 | Detail |
| C2H11g27258 | 11:25,209,221-25,211,002 | + | C1H11g04659 | CX11g011294 | LOC_Os11g47920 | Os11g0706200 | DHD1 | Detail |
| C2H11g22439 | 11:25,213,257-25,215,038 | + | C1H11g04659 | CX11g011294 | LOC_Os11g47920 | Os11g0706200 | DHD1 | Detail |
| C2H11g06022 | 11:25,230,967-25,232,748 | + | C1H11g04659 | CX11g011294 | LOC_Os11g47920 | Os11g0706200 | DHD1 | Detail |
| C2H11g08372 | 11:25,235,004-25,236,785 | + | C1H11g04659 | CX11g011294 | LOC_Os11g47920 | Os11g0706200 | DHD1 | Detail |
| C2H11g19765 | 11:25,239,041-25,240,822 | + | C1H11g04659 | CX11g011294 | LOC_Os11g47920 | Os11g0706200 | DHD1 | Detail |
| C2H11g09666 | 11:25,243,077-25,244,858 | + | C1H11g04659 | CX11g011294 | LOC_Os11g47920 | Os11g0706200 | DHD1 | Detail |
| C2H11g04605 | 11:25,247,113-25,248,894 | + | C1H11g04659 | CX11g011294 | LOC_Os11g47920 | Os11g0706200 | DHD1 | Detail |
| C2H11g22534 | 11:25,248,849-25,252,685 | - | C1H11g19911 | CX11g011259 | LOC_Os11g47930 | Os11g0706100 | - | Detail |
| C2H11g07460 | 11:25,261,613-25,261,864 | + | C1H11g11472 | CX11g011166 | LOC_Os11g47940 | - | - | Detail |
| C2H11g27435 | 11:25,267,751-25,268,521 | - | C1H11g31577 | CX11g012233 | LOC_Os11g47944 | Os11g0706600 | - | Detail |
| C2H11g00704 | 11:25,269,841-25,272,020 | - | C1H11g25613 | CX11g013780 | LOC_Os11g47950 | Os11g0706801 | - | Detail |
| C2H11g21517 | 11:25,277,494-25,280,569 | - | C1H11g31084 | CX11g011290 | LOC_Os11g47970 | Os11g0707050 | - | Detail |
| C2H11g14290 | 11:25,281,932-25,282,911 | - | C1H11g00228 | CX11g011290 | LOC_Os11g47980 | Os11g0707050 | - | Detail |
| C2H11g01082 | 11:25,292,740-25,293,477 | - | - | CX11g014838 | LOC_Os11g48000 | Os11g0707300 | - | Detail |
| C2H11g25497 | 11:25,298,893-25,302,456 | - | C1H11g10083 | CX11g011108 | LOC_Os11g48020 | Os11g0707600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |