| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g29614 | 5:2,569,002-2,571,358 | + | C2H5g01035 | CX5g038779 | LOC_Os05g05830 | Os05g0150800 | - | Detail |
| C1H5g12853 | 5:2,571,444-2,575,467 | - | C2H5g22602 | CX5g040193 | LOC_Os05g05840 | Os05g0150900 | - | Detail |
| C1H5g17386 | 5:2,579,606-2,588,713 | - | C2H5g00665 | CX5g038309 | LOC_Os05g05860 | Os05g0151000 | - | Detail |
| C1H5g18065 | 5:2,590,678-2,591,786 | + | C2H5g27389 | CX5g039485 | LOC_Os05g05920 | Os05g0151100 | - | Detail |
| C1H5g06297 | 5:2,594,428-2,596,156 | - | C2H5g27407 | CX5g039472 | LOC_Os05g05940 | Os05g0151300 | - | Detail |
| C1H5g06792 | 5:2,597,144-2,601,564 | - | C2H5g21053 | CX5g040146 | LOC_Os05g05950 | Os05g0151400 | - | Detail |
| C1H5g01718 | 5:2,610,576-2,616,033 | + | C2H5g20384 | CX5g040030 | LOC_Os05g05980 | Os01g0530366 | - | Detail |
| C1H5g18323 | 5:2,654,552-2,656,867 | + | C2H5g16960 | CX5g039066 | LOC_Os05g06050 | Os05g0152400 | - | Detail |
| C1H5g14690 | 5:2,659,766-2,661,875 | + | C2H5g22671 | CX5g038031 | LOC_Os05g06070 | Os05g0152600 | - | Detail |
| C1H5g06349 | 5:2,663,123-2,664,103 | + | C2H5g01945 | CX5g038697 | LOC_Os05g06080 | Os05g0152700 | - | Detail |
| C1H5g24575 | 5:2,666,910-2,668,094 | + | C2H5g28596 | CX5g040389 | LOC_Os05g06100 | Os05g0152900 | - | Detail |
| C1H5g04784 | 5:2,675,604-2,681,763 | + | C2H5g26954 | CX5g037943 | LOC_Os05g06110 | Os05g0153000 | - | Detail |
| C1H5g04725 | 5:2,688,899-2,691,273 | + | C2H5g07974 | CX5g040549 | LOC_Os05g06130 | Os05g0153200 | - | Detail |
| C1H5g10196 | 5:2,694,143-2,698,587 | - | C2H5g00901 | CX5g039092 | LOC_Os05g06140 | Os05g0153300 | - | Detail |
| C1H5g03800 | 5:2,761,096-2,767,577 | - | C2H5g06803 | CX5g040552 | LOC_Os05g06260 | Os05g0154500 | - | Detail |
| C1H5g01837 | 5:2,776,641-2,781,727 | - | C2H5g27616 | CX5g037333 | - | Os05g0154600 | - | Detail |
| C1H5g27946 | 5:2,789,944-2,796,761 | + | C2H5g09642 | CX5g040216 | LOC_Os05g06280 | Os05g0154700 | SRS3, SAR1, SGL, BHS1 | Detail |
| C1H5g26961 | 5:2,797,368-2,800,480 | + | C2H5g27791 | CX5g037806 | LOC_Os05g06280 | Os05g0154800 | - | Detail |
| C1H5g28631 | 5:2,797,792-2,798,691 | - | - | - | - | Os05g0154850 | - | Detail |
| C1H5g28003 | 5:2,801,188-2,802,775 | - | C2H5g30402 | CX5g040502 | LOC_Os05g06290 | Os05g0154900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g12926 | 2:8,398,024-8,407,326 | - | C1H2g02864 | CX2g021533 | LOC_Os02g15970 | Os02g0260400 | - | Detail |
| C2H2g06594 | 2:8,421,106-8,424,884 | + | C1H2g27751 | CX2g022911 | LOC_Os02g15980 | Os02g0260500 | - | Detail |
| C2H2g13675 | 2:8,429,741-8,434,737 | + | C1H2g12308 | CX2g024506 | LOC_Os02g16000 | Os02g0260700 | - | Detail |
| C2H2g11255 | 2:8,442,972-8,447,418 | + | C1H2g28079 | CX2g022743 | LOC_Os02g16030 | Os02g0261000 | - | Detail |
| C2H2g01960 | 2:8,453,074-8,456,145 | + | C1H2g11370 | CX2g019327 | LOC_Os02g16040 | Os02g0261100 | UBC5B, OsUBC5b, OsUBC15, UBC15 | Detail |
| C2H2g28917 | 2:8,474,737-8,476,580 | - | C1H2g19487 | CX2g019137 | LOC_Os02g16450 | Os02g0264300 | - | Detail |
| C2H2g15600 | 2:8,484,030-8,486,771 | + | C1H2g26765 | CX12g017249 | - | Os02g0264700 | - | Detail |
| C2H2g19236 | 2:8,491,369-8,493,017 | - | C1H2g01441 | CX2g020509 | LOC_Os02g16500 | Os02g0264800 | - | Detail |
| C2H2g18599 | 2:8,510,506-8,511,828 | + | C1H2g28048 | CX2g020341 | - | Os02g0265200 | - | Detail |
| C2H2g26523 | 2:8,519,973-8,524,819 | - | C1H2g03793 | CX2g020464 | LOC_Os02g16550 | Os02g0265400 | - | Detail |
| C2H2g05519 | 2:8,535,952-8,539,041 | + | C1H2g08201 | CX2g024020 | LOC_Os02g16600 | Os02g0265700 | - | Detail |
| C2H2g05448 | 2:8,541,749-8,543,418 | + | C1H2g01209 | CX2g024020 | LOC_Os02g16600 | - | - | Detail |
| C2H2g08731 | 2:8,547,536-8,550,180 | + | C1H2g19593 | CX2g018867 | LOC_Os02g16620 | Os02g0265900 | - | Detail |
| C2H2g11052 | 2:8,553,731-8,556,643 | + | C1H2g16850 | CX2g024509 | LOC_Os02g16630 | Os02g0266000 | - | Detail |
| C2H2g16179 | 2:8,557,636-8,560,663 | - | C1H2g16838 | CX2g020102 | LOC_Os02g16640 | Os02g0266100 | - | Detail |
| C2H2g13852 | 2:8,561,291-8,565,243 | + | C1H2g07521 | CX2g019119 | LOC_Os02g16650 | Os02g0266200 | - | Detail |
| C2H2g26198 | 2:8,565,648-8,569,602 | - | C1H2g20133 | CX2g019965 | LOC_Os02g16660 | Os02g0266300 | - | Detail |
| C2H2g08908 | 2:8,574,153-8,574,386 | + | C1H2g02204 | - | LOC_Os02g16670 | Os02g0266500 | - | Detail |
| C2H2g01743 | 2:8,574,402-8,582,399 | + | C1H2g23899 | CX2g021513 | LOC_Os02g16670 | Os02g0266500 | - | Detail |
| C2H2g25795 | 2:8,586,425-8,589,119 | - | C1H2g03225 | CX2g020479 | LOC_Os02g16680 | Os02g0266800 | RISBZ3, RITA1, RITA-1, OsbZIP20 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |