| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g29614 | 5:2,569,002-2,571,358 | + | C2H5g01035 | CX5g038779 | LOC_Os05g05830 | Os05g0150800 | - | Detail |
| C1H5g12853 | 5:2,571,444-2,575,467 | - | C2H5g22602 | CX5g040193 | LOC_Os05g05840 | Os05g0150900 | - | Detail |
| C1H5g17386 | 5:2,579,606-2,588,713 | - | C2H5g00665 | CX5g038309 | LOC_Os05g05860 | Os05g0151000 | - | Detail |
| C1H5g18065 | 5:2,590,678-2,591,786 | + | C2H5g27389 | CX5g039485 | LOC_Os05g05920 | Os05g0151100 | - | Detail |
| C1H5g06297 | 5:2,594,428-2,596,156 | - | C2H5g27407 | CX5g039472 | LOC_Os05g05940 | Os05g0151300 | - | Detail |
| C1H5g06792 | 5:2,597,144-2,601,564 | - | C2H5g21053 | CX5g040146 | LOC_Os05g05950 | Os05g0151400 | - | Detail |
| C1H5g01718 | 5:2,610,576-2,616,033 | + | C2H5g20384 | CX5g040030 | LOC_Os05g05980 | Os01g0530366 | - | Detail |
| C1H5g18323 | 5:2,654,552-2,656,867 | + | C2H5g16960 | CX5g039066 | LOC_Os05g06050 | Os05g0152400 | - | Detail |
| C1H5g14690 | 5:2,659,766-2,661,875 | + | C2H5g22671 | CX5g038031 | LOC_Os05g06070 | Os05g0152600 | - | Detail |
| C1H5g06349 | 5:2,663,123-2,664,103 | + | C2H5g01945 | CX5g038697 | LOC_Os05g06080 | Os05g0152700 | - | Detail |
| C1H5g24575 | 5:2,666,910-2,668,094 | + | C2H5g28596 | CX5g040389 | LOC_Os05g06100 | Os05g0152900 | - | Detail |
| C1H5g04784 | 5:2,675,604-2,681,763 | + | C2H5g26954 | CX5g037943 | LOC_Os05g06110 | Os05g0153000 | - | Detail |
| C1H5g04725 | 5:2,688,899-2,691,273 | + | C2H5g07974 | CX5g040549 | LOC_Os05g06130 | Os05g0153200 | - | Detail |
| C1H5g10196 | 5:2,694,143-2,698,587 | - | C2H5g00901 | CX5g039092 | LOC_Os05g06140 | Os05g0153300 | - | Detail |
| C1H5g03800 | 5:2,761,096-2,767,577 | - | C2H5g06803 | CX5g040552 | LOC_Os05g06260 | Os05g0154500 | - | Detail |
| C1H5g01837 | 5:2,776,641-2,781,727 | - | C2H5g27616 | CX5g037333 | - | Os05g0154600 | - | Detail |
| C1H5g27946 | 5:2,789,944-2,796,761 | + | C2H5g09642 | CX5g040216 | LOC_Os05g06280 | Os05g0154700 | SRS3, SAR1, SGL, BHS1 | Detail |
| C1H5g26961 | 5:2,797,368-2,800,480 | + | C2H5g27791 | CX5g037806 | LOC_Os05g06280 | Os05g0154800 | - | Detail |
| C1H5g28631 | 5:2,797,792-2,798,691 | - | - | - | - | Os05g0154850 | - | Detail |
| C1H5g28003 | 5:2,801,188-2,802,775 | - | C2H5g30402 | CX5g040502 | LOC_Os05g06290 | Os05g0154900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g21818 | 8:21,278,483-21,280,492 | + | C1H8g00918 | CX8g052900 | LOC_Os08g39630 | Os08g0506700 | OsFBH1, POH1 | Detail |
| C2H8g10072 | 8:21,295,505-21,297,031 | + | C1H8g02946 | CX8g053330 | LOC_Os08g39694 | Os08g0507000 | - | Detail |
| C2H8g30284 | 8:21,313,645-21,315,171 | + | C1H8g02946 | CX8g052494 | LOC_Os08g39730 | Os08g0508000 | CYP76C6 | Detail |
| C2H8g26138 | 8:21,322,863-21,324,395 | + | C1H8g02946 | CX8g053518 | LOC_Os08g39730 | Os08g0508000 | CYP76C6 | Detail |
| C2H8g03218 | 8:21,324,619-21,327,496 | - | C1H8g28706 | CX8g053499 | LOC_Os08g39740 | Os08g0508100 | - | Detail |
| C2H8g14917 | 8:21,336,534-21,341,315 | - | C1H8g26764 | CX8g054344 | LOC_Os08g39810 | Os08g0508500 | - | Detail |
| C2H8g11766 | 8:21,345,280-21,347,819 | + | C1H8g11318 | CX8g053265 | LOC_Os08g39820 | Os08g0508600 | - | Detail |
| C2H8g22017 | 8:21,350,208-21,352,058 | + | C1H8g03168 | CX8g054476 | LOC_Os08g39830 | Os08g0508700 | - | Detail |
| C2H8g14861 | 8:21,355,672-21,360,638 | - | C1H8g18312 | CX8g054768 | LOC_Os08g39840 | Os08g0508800 | OsHI-LOX | Detail |
| C2H8g19828 | 8:21,373,139-21,381,558 | + | C1H8g17933 | CX8g050519 | LOC_Os08g39840 | Os08g0509100 | - | Detail |
| C2H8g21670 | 8:21,381,741-21,386,155 | - | C1H8g19400 | CX8g053424 | LOC_Os08g39860 | Os08g0509200 | - | Detail |
| C2H8g14320 | 8:21,395,983-21,401,382 | - | C1H8g14217 | CX8g050462 | LOC_Os08g39870 | Os08g0509400 | - | Detail |
| C2H8g18791 | 8:21,402,713-21,405,780 | + | C1H8g31122 | CX8g052395 | LOC_Os08g39880 | Os08g0509500 | - | Detail |
| C2H8g07989 | 8:21,407,747-21,408,052 | - | C1H8g04991 | CX8g052375 | LOC_Os08g39890 | Os08g0509600 | WFP, OsSPL14, SPL14, IPA1, WFP/IPA1 | Detail |
| C2H8g28923 | 8:21,408,776-21,411,165 | - | C1H8g04991 | CX8g052375 | LOC_Os08g39890 | Os08g0509600 | WFP, OsSPL14, SPL14, IPA1, WFP/IPA1 | Detail |
| C2H8g28069 | 8:21,431,029-21,431,957 | - | C1H8g16265 | CX8g051662 | LOC_Os08g39940 | Os08g0510101 | - | Detail |
| C2H8g16182 | 8:21,432,150-21,432,624 | - | C1H8g23320 | CX8g051662 | LOC_Os08g39940 | Os08g0510101 | - | Detail |
| C2H8g05100 | 8:21,434,040-21,438,479 | + | C1H8g13339 | CX8g051410 | LOC_Os08g39950 | Os08g0510300 | OsHAK26 | Detail |
| C2H8g30189 | 8:21,438,689-21,441,258 | - | C1H8g11932 | CX8g051070 | LOC_Os08g39960 | Os08g0510400 | - | Detail |
| C2H8g03377 | 8:21,442,329-21,445,614 | + | C1H8g17932 | CX8g053229 | LOC_Os08g39970 | Os08g0510500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |