| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g04550 | 5:2,409,855-2,417,940 | - | C2H5g08617 | CX5g040844 | LOC_Os05g05580 | Os05g0148500 | - | Detail |
| C1H5g16478 | 5:2,419,600-2,425,618 | - | C2H5g16069 | CX5g036905 | LOC_Os05g05590 | Os05g0148600 | OsNHX3 | Detail |
| C1H5g12042 | 5:2,428,676-2,433,733 | + | C2H5g09761 | CX5g038573 | LOC_Os05g05600 | Os05g0148700 | - | Detail |
| C1H5g16614 | 5:2,435,391-2,436,158 | + | - | CX5g037439 | LOC_Os05g05610 | Os05g0148800 | - | Detail |
| C1H5g23031 | 5:2,439,035-2,440,054 | + | C2H5g00872 | CX5g038518 | LOC_Os05g05620 | Os05g0148900 | - | Detail |
| C1H5g21277 | 5:2,440,564-2,441,112 | + | - | CX5g038748 | LOC_Os05g05640 | Os05g0149000 | OsPMEI21 | Detail |
| C1H5g09882 | 5:2,447,466-2,450,177 | + | C2H5g11195 | CX5g038796 | LOC_Os05g03110 | Os05g0149200 | - | Detail |
| C1H5g20173 | 5:2,452,138-2,455,337 | + | C2H5g11195 | CX5g038796 | LOC_Os05g05660 | - | - | Detail |
| C1H5g08164 | 5:2,456,692-2,457,893 | - | C2H5g03497 | CX5g040850 | LOC_Os05g05680 | Os05g0149400 | ACO5, OsACO5 | Detail |
| C1H5g12513 | 5:2,468,619-2,471,238 | + | C2H5g16494 | CX5g040805 | LOC_Os05g05690 | Os05g0149500 | - | Detail |
| C1H5g08311 | 5:2,472,802-2,479,423 | - | C2H5g25711 | CX5g038928 | LOC_Os05g05700 | Os05g0149600 | OsCUL1-2 | Detail |
| C1H5g22304 | 5:2,489,236-2,495,106 | + | C2H5g15844 | CX5g038404 | LOC_Os05g05710 | Os05g0149800 | - | Detail |
| C1H5g26443 | 5:2,496,088-2,501,842 | + | C2H5g18610 | CX5g036871 | LOC_Os05g05720 | Os05g0149900 | - | Detail |
| C1H5g12097 | 5:2,505,390-2,506,200 | - | C2H5g00389 | CX5g037725 | - | - | - | Detail |
| C1H5g19233 | 5:2,508,050-2,510,894 | - | C2H5g17068 | CX5g039274 | LOC_Os05g05740 | Os05g0150000 | HTH5, PLPHP | Detail |
| C1H5g21935 | 5:2,514,334-2,524,289 | + | C2H5g22435 | CX5g036676 | LOC_Os05g05780 | Os05g0150300 | OsCHR727, CHR727 | Detail |
| C1H5g05513 | 5:2,524,698-2,529,274 | - | C2H5g24081 | CX5g040936 | LOC_Os05g05790 | Os05g0150400 | OsDRB3 | Detail |
| C1H5g15222 | 5:2,532,326-2,538,743 | - | C2H5g02158 | CX5g037178 | LOC_Os05g05800 | Os05g0150500 | TIR1, OsTIR1 | Detail |
| C1H5g02062 | 5:2,546,962-2,553,861 | - | C2H5g00353 | CX5g037551 | LOC_Os05g05810 | Os05g0150600 | OsRecQsim | Detail |
| C1H5g05063 | 5:2,567,192-2,567,847 | + | C2H5g03107 | CX5g038863 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g21585 | 10:19,068,088-19,069,341 | + | C1H10g13490 | - | LOC_Os10g39340 | Os10g0538200 | - | Detail |
| C2H10g18471 | 10:19,071,335-19,072,528 | + | C1H10g13490 | - | LOC_Os10g39350 | Os10g0538200 | - | Detail |
| C2H10g01295 | 10:19,074,648-19,075,916 | + | C1H10g13490 | - | LOC_Os10g39360 | Os10g0538200 | - | Detail |
| C2H10g15542 | 10:19,078,478-19,079,692 | + | C1H10g13490 | - | LOC_Os10g39380 | Os10g0539200 | - | Detail |
| C2H10g28161 | 10:19,083,691-19,084,908 | + | C1H10g13490 | - | LOC_Os10g39390 | Os10g0538200 | - | Detail |
| C2H10g04261 | 10:19,088,593-19,089,648 | - | C1H10g10964 | CX10g008292 | LOC_Os10g39400 | Os10g0539400 | - | Detail |
| C2H10g07941 | 10:19,091,265-19,091,576 | - | C1H1g21523 | CX5g037421 | LOC_Os10g39410 | Os10g0539500 | - | Detail |
| C2H10g11877 | 10:19,100,038-19,104,698 | + | C1H10g24010 | CX10g007783 | LOC_Os10g39420 | Os10g0539600 | SPK | Detail |
| C2H10g16241 | 10:19,107,680-19,110,193 | + | - | - | LOC_Os10g39430 | Os10g0539700 | - | Detail |
| C2H10g11566 | 10:19,122,075-19,126,606 | + | C1H10g20621 | CX10g009854 | LOC_Os10g39440 | Os10g0539900 | - | Detail |
| C2H10g06528 | 10:19,129,458-19,130,240 | - | C1H10g28982 | CX10g009092 | LOC_Os10g39450 | Os10g0540000 | - | Detail |
| C2H10g30541 | 10:19,133,648-19,135,717 | - | C1H10g02515 | CX10g009712 | LOC_Os10g39460 | Os10g0540100 | - | Detail |
| C2H10g17265 | 10:19,139,076-19,141,890 | + | C1H10g22565 | CX10g008485 | LOC_Os10g39510 | Os10g0540900 | - | Detail |
| C2H10g25206 | 10:19,147,666-19,152,490 | - | C1H10g02223 | CX10g008713 | LOC_Os10g39520 | Os10g0541000 | - | Detail |
| C2H10g10998 | 10:19,163,013-19,165,798 | + | C1H10g27868 | CX10g008920 | LOC_Os10g39540 | Os10g0541200 | - | Detail |
| C2H10g20469 | 10:19,167,659-19,168,777 | - | C1H10g24272 | CX10g009747 | LOC_Os10g39550 | - | - | Detail |
| C2H10g17509 | 10:19,169,670-19,171,805 | - | C1H10g24272 | CX10g009747 | LOC_Os10g39550 | Os10g0463400 | EF1, Ef1 (Ef2), Ef2, Ef1, Ehd1, Eh1(t)*, EF1, ef1, qEHD-10-1(t) (qEhd1), OsRR30, OsRR22 | Detail |
| C2H10g24951 | 10:19,177,684-19,180,857 | - | C1H10g05028 | CX10g008342 | LOC_Os10g39560 | Os10g0541600 | - | Detail |
| C2H10g29312 | 10:19,201,408-19,201,761 | + | C1H10g25760 | CX10g009793 | LOC_Os10g39610 | Os10g0542100 | - | Detail |
| C2H10g15843 | 10:19,202,134-19,207,328 | - | C1H10g28098 | CX10g008328 | LOC_Os10g39620 | Os10g0542200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |