| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g04550 | 5:2,409,855-2,417,940 | - | C2H5g08617 | CX5g040844 | LOC_Os05g05580 | Os05g0148500 | - | Detail |
| C1H5g16478 | 5:2,419,600-2,425,618 | - | C2H5g16069 | CX5g036905 | LOC_Os05g05590 | Os05g0148600 | OsNHX3 | Detail |
| C1H5g12042 | 5:2,428,676-2,433,733 | + | C2H5g09761 | CX5g038573 | LOC_Os05g05600 | Os05g0148700 | - | Detail |
| C1H5g16614 | 5:2,435,391-2,436,158 | + | - | CX5g037439 | LOC_Os05g05610 | Os05g0148800 | - | Detail |
| C1H5g23031 | 5:2,439,035-2,440,054 | + | C2H5g00872 | CX5g038518 | LOC_Os05g05620 | Os05g0148900 | - | Detail |
| C1H5g21277 | 5:2,440,564-2,441,112 | + | - | CX5g038748 | LOC_Os05g05640 | Os05g0149000 | OsPMEI21 | Detail |
| C1H5g09882 | 5:2,447,466-2,450,177 | + | C2H5g11195 | CX5g038796 | LOC_Os05g03110 | Os05g0149200 | - | Detail |
| C1H5g20173 | 5:2,452,138-2,455,337 | + | C2H5g11195 | CX5g038796 | LOC_Os05g05660 | - | - | Detail |
| C1H5g08164 | 5:2,456,692-2,457,893 | - | C2H5g03497 | CX5g040850 | LOC_Os05g05680 | Os05g0149400 | ACO5, OsACO5 | Detail |
| C1H5g12513 | 5:2,468,619-2,471,238 | + | C2H5g16494 | CX5g040805 | LOC_Os05g05690 | Os05g0149500 | - | Detail |
| C1H5g08311 | 5:2,472,802-2,479,423 | - | C2H5g25711 | CX5g038928 | LOC_Os05g05700 | Os05g0149600 | OsCUL1-2 | Detail |
| C1H5g22304 | 5:2,489,236-2,495,106 | + | C2H5g15844 | CX5g038404 | LOC_Os05g05710 | Os05g0149800 | - | Detail |
| C1H5g26443 | 5:2,496,088-2,501,842 | + | C2H5g18610 | CX5g036871 | LOC_Os05g05720 | Os05g0149900 | - | Detail |
| C1H5g12097 | 5:2,505,390-2,506,200 | - | C2H5g00389 | CX5g037725 | - | - | - | Detail |
| C1H5g19233 | 5:2,508,050-2,510,894 | - | C2H5g17068 | CX5g039274 | LOC_Os05g05740 | Os05g0150000 | HTH5, PLPHP | Detail |
| C1H5g21935 | 5:2,514,334-2,524,289 | + | C2H5g22435 | CX5g036676 | LOC_Os05g05780 | Os05g0150300 | OsCHR727, CHR727 | Detail |
| C1H5g05513 | 5:2,524,698-2,529,274 | - | C2H5g24081 | CX5g040936 | LOC_Os05g05790 | Os05g0150400 | OsDRB3 | Detail |
| C1H5g15222 | 5:2,532,326-2,538,743 | - | C2H5g02158 | CX5g037178 | LOC_Os05g05800 | Os05g0150500 | TIR1, OsTIR1 | Detail |
| C1H5g02062 | 5:2,546,962-2,553,861 | - | C2H5g00353 | CX5g037551 | LOC_Os05g05810 | Os05g0150600 | OsRecQsim | Detail |
| C1H5g05063 | 5:2,567,192-2,567,847 | + | C2H5g03107 | CX5g038863 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g00153 | 7:1,930,476-1,933,199 | - | C1H7g31696 | CX7g049707 | LOC_Os07g04860 | Os07g0141450 | - | Detail |
| C2H7g16296 | 7:1,935,725-1,940,063 | + | C1H7g09323 | CX7g046101 | LOC_Os07g04850 | Os07g0141600 | - | Detail |
| C2H7g21156 | 7:1,940,461-1,944,748 | - | C1H7g23727 | CX7g046767 | LOC_Os07g09940 | Os07g0141700 | - | Detail |
| C2H7g11404 | 7:1,962,002-1,963,119 | + | C1H7g18918 | CX7g046239 | LOC_Os07g04910 | Os07g0142000 | - | Detail |
| C2H7g00732 | 7:1,966,086-1,966,226 | + | - | - | - | Os07g0142100 | OsIMA2 | Detail |
| C2H7g05991 | 7:1,967,709-1,968,206 | + | C1H7g24090 | CX7g046276 | LOC_Os07g04930 | Os07g0142200 | - | Detail |
| C2H7g04010 | 7:1,972,676-1,973,182 | + | C1H7g05719 | CX7g048543 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| C2H7g10792 | 7:1,980,426-1,980,860 | + | C1H7g05719 | CX7g048364 | LOC_Os07g04960 | Os07g0142600 | - | Detail |
| C2H7g14480 | 7:1,984,207-1,985,655 | - | C1H7g16311 | CX7g049302 | LOC_Os07g04970 | Os07g0142700 | - | Detail |
| C2H7g21727 | 7:1,991,575-1,994,468 | + | C1H7g23399 | CX7g046865 | LOC_Os07g05000 | Os07g0142900 | - | Detail |
| C2H7g27275 | 7:1,997,329-2,001,005 | + | C1H7g28462 | CX7g048357 | LOC_Os07g05000 | Os07g0143000 | - | Detail |
| C2H7g14513 | 7:2,006,726-2,008,468 | + | C1H7g12552 | CX7g048872 | LOC_Os07g05010 | Os07g0143200 | OsPIF14, OsPIF14β, OsPIF14b, PIL14 | Detail |
| C2H7g20668 | 7:2,017,719-2,020,215 | - | C1H7g09908 | CX7g046854 | - | - | - | Detail |
| C2H7g24721 | 7:2,020,489-2,023,994 | - | C1H7g25943 | CX7g048569 | LOC_Os07g05040 | Os07g0143600 | - | Detail |
| C2H7g00608 | 7:2,024,719-2,030,133 | - | C1H7g01640 | CX7g048216 | LOC_Os07g05050 | Os07g0143700 | OsRH53 | Detail |
| C2H7g04210 | 7:2,039,725-2,041,583 | + | C1H7g10624 | CX7g049966 | LOC_Os07g05110 | Os07g0144500 | - | Detail |
| C2H7g16275 | 7:2,041,986-2,043,862 | - | C1H7g23348 | CX7g049847 | LOC_Os07g05120 | - | - | Detail |
| C2H7g17564 | 7:2,044,616-2,049,320 | - | C1H7g28674 | - | - | - | - | Detail |
| C2H7g12809 | 7:2,051,120-2,051,597 | + | C1H7g03354 | - | - | Os07g0144732 | - | Detail |
| C2H7g08843 | 7:2,058,814-2,059,338 | + | C1H7g09042 | CX7g046504 | LOC_Os07g05160 | Os07g0144900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |