| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g19739 | 5:2,250,014-2,260,109 | - | C2H5g11901 | CX5g040491 | LOC_Os05g05230 | Os05g0144300 | OsCHR719, CHR719 | Detail |
| C1H5g01986 | 5:2,263,434-2,272,301 | + | C2H5g11499 | CX5g040168 | LOC_Os05g05240 | Os05g0144400 | OsPPKL2 | Detail |
| C1H5g16759 | 5:2,277,990-2,283,702 | - | C2H5g14473 | CX5g037072 | LOC_Os05g05260 | Os05g0144800 | - | Detail |
| C1H5g20568 | 5:2,288,964-2,292,009 | + | C2H5g09730 | CX5g039685 | LOC_Os05g05270 | Os05g0144900 | - | Detail |
| C1H5g26722 | 5:2,292,134-2,297,715 | - | C2H5g16721 | CX5g036804 | LOC_Os05g05280 | Os05g0145000 | PTB1 | Detail |
| C1H5g13013 | 5:2,304,721-2,307,849 | + | C2H5g12450 | CX5g037397 | LOC_Os05g05300 | Os05g0145300 | - | Detail |
| C1H5g17300 | 5:2,308,107-2,311,075 | - | C2H5g08722 | CX5g038713 | LOC_Os05g05310 | Os05g0145400 | OsVIL4 | Detail |
| C1H5g19785 | 5:2,313,419-2,319,545 | - | C2H5g11049 | CX5g038846 | LOC_Os05g05320 | Os05g0145600 | - | Detail |
| C1H5g12398 | 5:2,321,537-2,326,334 | - | C2H5g14441 | CX5g039530 | LOC_Os05g05330 | Os05g0145700 | - | Detail |
| C1H5g10146 | 5:2,330,203-2,338,350 | - | C2H5g28800 | CX5g036969 | LOC_Os05g05354 | Os05g0146100 | - | Detail |
| C1H5g25798 | 5:2,346,320-2,352,085 | - | C2H5g07892 | CX5g040919 | LOC_Os05g05440 | Os05g0147133 | - | Detail |
| C1H5g22423 | 5:2,352,546-2,356,919 | + | C2H5g17748 | CX5g040332 | LOC_Os05g05450 | Os05g0147200 | - | Detail |
| C1H5g22301 | 5:2,357,122-2,358,267 | - | C2H5g04921 | CX5g037149 | LOC_Os05g05460 | Os05g0147300 | - | Detail |
| C1H5g03256 | 5:2,358,872-2,363,518 | - | C2H5g18351 | CX5g037339 | LOC_Os05g05470 | Os05g0147400 | - | Detail |
| C1H5g15984 | 5:2,365,499-2,373,534 | + | C2H5g29242 | CX5g036816 | LOC_Os05g05480 | Os05g0147500 | - | Detail |
| C1H5g18816 | 5:2,384,257-2,384,617 | + | C2H9g15050 | CX7g049955 | LOC_Os07g49040 | Os10g0408700 | - | Detail |
| C1H5g06010 | 5:2,387,966-2,395,535 | + | C2H6g06829 | - | - | - | - | Detail |
| C1H5g00759 | 5:2,395,480-2,405,483 | - | C2H5g29270 | CX5g037507 | LOC_Os05g05550 | Os05g0146900 | - | Detail |
| C1H5g06824 | 5:2,405,519-2,407,688 | + | C2H5g24875 | CX5g040568 | LOC_Os05g05560 | Os05g0148300 | - | Detail |
| C1H5g29627 | 5:2,408,214-2,409,389 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19126 | 4:28,482,932-28,483,633 | - | C1H4g06177 | CX4g036135 | LOC_Os04g55520 | Os04g0648900 | - | Detail |
| C2H4g07264 | 4:28,514,758-28,515,506 | + | C1H4g09680 | - | LOC_Os04g55560 | - | - | Detail |
| C2H4g14278 | 4:28,515,961-28,517,749 | + | C1H4g09680 | CX4g031647 | LOC_Os04g55560 | Os04g0649100 | SHAT1, AP2/EREBP#043, AP2/EREBP43 | Detail |
| C2H4g17474 | 4:28,522,715-28,529,752 | + | C1H4g00144 | CX4g035239 | LOC_Os04g55570 | Os04g0649200 | - | Detail |
| C2H4g02532 | 4:28,539,464-28,540,345 | - | C1H4g30735 | CX4g032527 | LOC_Os04g55590 | Os04g0649400 | WOX4, OsWOX4, Os WOX4 | Detail |
| C2H4g16594 | 4:28,545,758-28,546,096 | - | - | CX4g035485 | LOC_Os04g55600 | Os04g0649500 | - | Detail |
| C2H4g01325 | 4:28,552,020-28,552,618 | + | C1H4g22307 | - | - | - | - | Detail |
| C2H4g05985 | 4:28,552,135-28,552,428 | - | - | CX4g035117 | LOC_Os04g55610 | Os04g0649600 | - | Detail |
| C2H4g00524 | 4:28,554,014-28,557,592 | - | C1H4g26510 | CX4g031472 | LOC_Os04g55620 | Os04g0649700 | - | Detail |
| C2H4g24247 | 4:28,561,500-28,562,462 | + | C1H4g26377 | CX4g033189 | LOC_Os04g55640 | Os04g0649900 | - | Detail |
| C2H4g16213 | 4:28,567,208-28,567,720 | - | - | - | - | - | - | Detail |
| C2H4g10875 | 4:28,567,783-28,568,747 | + | C1H4g19253 | CX4g032778 | LOC_Os04g43030 | Os04g0509100 | - | Detail |
| C2H4g01573 | 4:28,569,522-28,573,198 | - | C1H4g30646 | CX4g032034 | LOC_Os04g55650 | Os04g0650000 | - | Detail |
| C2H4g09445 | 4:28,578,934-28,580,745 | - | C1H4g23223 | CX4g034578 | LOC_Os04g55660 | Os04g0650200 | - | Detail |
| C2H4g25070 | 4:28,582,467-28,585,780 | - | C1H4g17876 | CX4g035022 | LOC_Os04g55670 | Os04g0650300 | OsGT43I | Detail |
| C2H4g15264 | 4:28,590,936-28,592,348 | - | C1H4g16494 | CX4g036592 | LOC_Os04g55680 | Os04g0506000 | - | Detail |
| C2H4g30089 | 4:28,593,163-28,595,330 | + | C1H4g20767 | CX4g032417 | LOC_Os04g55690 | Os04g0650500 | - | Detail |
| C2H4g16279 | 4:28,595,912-28,598,901 | - | C1H4g29586 | CX4g034904 | LOC_Os04g55700 | Os04g0650600 | - | Detail |
| C2H4g25286 | 4:28,607,792-28,610,745 | + | C1H4g11243 | CX4g032420 | LOC_Os04g55710 | Os04g0650700 | - | Detail |
| C2H4g06390 | 4:28,613,676-28,616,566 | + | C1H4g03632 | CX4g033907 | LOC_Os04g55720 | Os04g0650800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |