| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g00153 | 5:2,007,532-2,008,846 | - | C2H3g15322 | CX3g028459 | - | - | - | Detail |
| C1H5g17291 | 5:2,036,969-2,037,525 | - | C2H5g03061 | CX5g038058 | - | Os05g0140000 | - | Detail |
| C1H5g01364 | 5:2,037,899-2,040,606 | + | C2H5g22528 | CX5g041027 | LOC_Os05g04820 | Os05g0140100 | - | Detail |
| C1H5g10969 | 5:2,048,758-2,050,037 | - | - | - | - | - | - | Detail |
| C1H5g06617 | 5:2,052,448-2,055,156 | + | C2H5g17854 | CX5g041028 | LOC_Os05g04850 | Os05g0140500 | OsY14a, Y14a, Tsunagi, RBM8 | Detail |
| C1H5g27337 | 5:2,056,505-2,060,106 | - | C2H5g11120 | CX5g037434 | LOC_Os05g04860 | Os05g0140600 | - | Detail |
| C1H5g07901 | 5:2,067,373-2,068,757 | - | C2H5g05137 | CX5g037644 | LOC_Os05g04870 | Os05g0140800 | - | Detail |
| C1H5g21345 | 5:2,074,830-2,081,928 | - | C2H5g05092 | CX5g040189 | LOC_Os05g04890 | Os05g0141000 | - | Detail |
| C1H5g19698 | 5:2,084,330-2,090,071 | - | C2H5g10662 | CX5g039228 | LOC_Os05g04914 | Os05g0141200 | - | Detail |
| C1H5g02890 | 5:2,099,945-2,102,971 | - | C2H5g22940 | CX5g039514 | LOC_Os05g04940 | Os05g0141400 | - | Detail |
| C1H5g01265 | 5:2,103,827-2,108,580 | - | C2H5g29281 | CX5g037614 | LOC_Os05g04950 | Os05g0141500 | - | Detail |
| C1H5g28545 | 5:2,115,264-2,124,756 | + | C2H5g24711 | CX5g037763 | LOC_Os05g04960 | Os05g0141700 | - | Detail |
| C1H5g21606 | 5:2,198,360-2,202,078 | + | C2H5g02199 | CX5g040648 | LOC_Os05g05130 | Os05g0143200 | - | Detail |
| C1H5g00987 | 5:2,202,564-2,205,996 | - | C2H5g18500 | CX5g038230 | LOC_Os05g05140 | Os05g0143300 | - | Detail |
| C1H5g04744 | 5:2,208,500-2,210,752 | + | C2H5g21384 | CX5g036859 | LOC_Os05g05150 | Os05g0143400 | - | Detail |
| C1H5g27457 | 5:2,213,636-2,220,102 | + | C2H5g29296 | CX5g036917 | LOC_Os05g05160 | Os05g0143500 | - | Detail |
| C1H5g10365 | 5:2,223,167-2,226,613 | - | C2H5g22685 | CX5g037961 | LOC_Os05g05180 | Os05g0143800 | - | Detail |
| C1H5g29191 | 5:2,230,306-2,237,667 | - | C2H5g06932 | CX5g037824 | LOC_Os05g05200 | Os05g0144000 | - | Detail |
| C1H5g02281 | 5:2,238,489-2,241,863 | + | C2H5g15662 | CX5g039026 | LOC_Os05g05210 | Os05g0144100 | - | Detail |
| C1H5g15096 | 5:2,243,438-2,248,169 | - | C2H5g20065 | CX5g038093 | LOC_Os05g05220 | Os05g0144200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g15485 | 1:3,125,900-3,126,514 | - | C1H1g11658 | - | - | - | - | Detail |
| C2H1g18505 | 1:3,129,253-3,133,224 | - | C1H1g17887 | CX1g002044 | LOC_Os01g07520 | Os01g0169900 | - | Detail |
| C2H1g07559 | 1:3,134,423-3,138,097 | - | C1H1g06478 | CX1g001973 | LOC_Os01g07530 | Os01g0170000 | - | Detail |
| C2H1g19408 | 1:3,146,269-3,151,457 | + | C1H1g14550 | CX1g006120 | LOC_Os01g07540 | Os01g0170100 | - | Detail |
| C2H1g12386 | 1:3,156,879-3,160,770 | + | C1H1g09374 | CX1g002596 | LOC_Os01g07560 | Os01g0170300 | - | Detail |
| C2H1g26052 | 1:3,165,620-3,171,740 | - | C1H1g15607 | CX1g002169 | LOC_Os01g07570 | Os01g0170500 | - | Detail |
| C2H1g23567 | 1:3,177,790-3,180,762 | + | C1H1g29516 | CX1g005563 | LOC_Os01g07590 | Os01g0170600 | - | Detail |
| C2H1g19388 | 1:3,181,446-3,182,620 | + | C1H1g03810 | CX1g006498 | LOC_Os01g07590 | Os01g0849600 | - | Detail |
| C2H1g10083 | 1:3,184,294-3,187,662 | + | C1H1g30649 | CX1g001258 | LOC_Os01g07600 | Os01g0170700 | - | Detail |
| C2H1g28231 | 1:3,193,277-3,195,028 | + | C1H1g08776 | CX1g004971 | LOC_Os01g07610 | Os01g0170800 | - | Detail |
| C2H1g06196 | 1:3,197,486-3,197,839 | - | C1H1g30232 | CX1g005520 | LOC_Os01g07620 | Os01g0170900 | - | Detail |
| C2H1g29680 | 1:3,202,417-3,208,091 | - | C1H1g10821 | CX1g000199 | LOC_Os01g07630 | Os01g0171000 | - | Detail |
| C2H1g04571 | 1:3,214,303-3,216,970 | - | C1H1g27422 | CX1g001021 | LOC_Os01g07640 | Os01g0171100 | - | Detail |
| C2H1g23784 | 1:3,235,772-3,239,402 | - | C1H1g10155 | CX1g001907 | LOC_Os01g07700 | Os01g0171800 | - | Detail |
| C2H1g20738 | 1:3,242,854-3,244,377 | + | C1H1g26958 | CX1g002415 | LOC_Os01g07710 | - | - | Detail |
| C2H1g20386 | 1:3,245,079-3,248,708 | - | C1H1g20095 | CX1g006763 | LOC_Os01g07720 | Os01g0172000 | - | Detail |
| C2H1g03942 | 1:3,251,344-3,253,664 | + | C1H1g10981 | CX1g003588 | LOC_Os01g07730 | Os01g0172100 | - | Detail |
| C2H1g18220 | 1:3,253,753-3,258,530 | - | C1H1g04902 | CX1g004788 | LOC_Os01g07740 | Os01g0172200 | OsDB10 | Detail |
| C2H1g18869 | 1:3,260,405-3,262,934 | - | C1H1g23634 | CX1g001295 | LOC_Os01g07750 | Os01g0172300 | - | Detail |
| C2H1g28778 | 1:3,264,187-3,268,422 | - | C1H1g21846 | CX1g001900 | LOC_Os01g07760 | Os01g0172400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |