| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g21635 | 5:1,800,625-1,801,726 | + | C2H5g10317 | CX5g038822 | LOC_Os05g04470 | Os05g0135200 | - | Detail |
| C1H5g11348 | 5:1,806,814-1,808,174 | + | C2H5g12500 | CX5g038822 | LOC_Os05g04490 | Os05g0135400 | OsPRX70 | Detail |
| C1H5g11788 | 5:1,813,487-1,815,667 | + | C2H5g16100 | CX5g038822 | LOC_Os05g04500 | Os05g0135500 | - | Detail |
| C1H5g05411 | 5:1,823,550-1,824,740 | + | C2H1g10329 | CX5g039963 | LOC_Os05g04510 | Os05g0135700 | - | Detail |
| C1H5g15318 | 5:1,829,349-1,833,577 | + | C2H5g15340 | CX5g039240 | LOC_Os05g04520 | Os05g0135800 | RLCK178, OsPti1a, OsRLCK178 | Detail |
| C1H5g22825 | 5:1,834,109-1,836,299 | - | C2H5g09071 | CX5g040556 | LOC_Os05g04530 | Os05g0135900 | - | Detail |
| C1H5g04500 | 5:1,841,006-1,842,757 | + | C2H5g21536 | - | - | - | - | Detail |
| C1H5g10755 | 5:1,855,741-1,859,524 | - | C2H5g01548 | CX5g039210 | LOC_Os05g04550 | Os05g0136200 | - | Detail |
| C1H5g22395 | 5:1,864,782-1,869,273 | + | - | - | - | Os05g0136400 | - | Detail |
| C1H5g30580 | 5:1,888,889-1,895,075 | + | C2H5g23155 | CX5g040521 | LOC_Os05g04584 | Os05g0136900 | OsPMT2, OsAT3 | Detail |
| C1H5g18480 | 5:1,908,700-1,914,968 | + | C2H5g06046 | CX5g040420 | LOC_Os05g04610 | Os05g0137200 | - | Detail |
| C1H5g19392 | 5:1,915,781-1,917,452 | + | C2H5g14079 | CX5g039843 | LOC_Os05g04620 | Os05g0137300 | - | Detail |
| C1H5g26357 | 5:1,918,487-1,922,420 | + | C2H5g14963 | CX5g040603 | LOC_Os05g04630 | Os05g0137400 | - | Detail |
| C1H5g12317 | 5:1,922,878-1,928,299 | - | C2H5g23559 | CX5g036724 | LOC_Os05g04640 | Os05g0137500 | OsWRKY5 | Detail |
| C1H5g04306 | 5:1,939,992-1,941,266 | + | C2H5g03222 | CX5g037574 | LOC_Os05g04650 | Os05g0137600 | - | Detail |
| C1H5g13155 | 5:1,941,560-1,943,068 | - | C2H5g28363 | - | LOC_Os05g04660 | Os05g0137700 | - | Detail |
| C1H5g04433 | 5:1,960,400-1,960,992 | - | C2H5g07352 | CX1g002314 | LOC_Os05g04700 | Os05g0138300 | OsLti6b | Detail |
| C1H5g25088 | 5:1,984,002-1,985,777 | + | C2H5g19962 | CX5g037589 | LOC_Os05g04740 | Os05g0139100 | APG | Detail |
| C1H5g25511 | 5:1,988,776-1,989,975 | - | C2H5g25266 | CX5g037123 | LOC_Os05g04750 | Os05g0139200 | - | Detail |
| C1H5g18751 | 5:1,997,995-1,999,179 | - | C2H5g23665 | CX5g037123 | LOC_Os05g04770 | Os05g0139300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22623 | 4:21,627,857-21,628,402 | - | - | CX4g032772 | - | - | - | Detail |
| C2H4g18693 | 4:21,633,822-21,635,195 | - | - | CX4g032139 | LOC_Os04g42310 | Os04g0501500 | - | Detail |
| C2H4g30574 | 4:21,638,433-21,642,926 | - | C1H4g13362 | CX4g034319 | LOC_Os04g55960 | Os04g0653400 | - | Detail |
| C2H4g27535 | 4:21,648,647-21,655,605 | - | C1H4g15554 | CX4g035234 | LOC_Os04g42320 | Os04g0501600 | - | Detail |
| C2H4g15764 | 4:21,658,127-21,664,301 | + | C1H4g01323 | CX4g034189 | LOC_Os04g42330 | Os04g0501700 | - | Detail |
| C2H4g27962 | 4:21,667,888-21,669,934 | + | C1H4g00716 | CX4g032700 | LOC_Os04g42340 | Os04g0501800 | - | Detail |
| C2H4g03735 | 4:21,675,409-21,675,966 | + | - | - | - | - | - | Detail |
| C2H4g27570 | 4:21,676,488-21,678,014 | + | C1H4g29745 | CX4g034230 | LOC_Os04g42360 | Os04g0502100 | - | Detail |
| C2H4g20801 | 4:21,678,671-21,686,370 | + | C1H4g31377 | CX4g031888 | LOC_Os04g42370 | Os04g0502200 | - | Detail |
| C2H4g21349 | 4:21,689,274-21,691,146 | - | C1H4g24462 | CX4g036274 | LOC_Os04g42380 | Os04g0502300 | - | Detail |
| C2H4g03955 | 4:21,703,469-21,705,151 | - | C1H4g11967 | CX4g033311 | LOC_Os04g38960 | Os04g0422950 | - | Detail |
| C2H4g30598 | 4:21,707,078-21,712,115 | + | C1H4g11983 | CX4g032715 | LOC_Os04g42420 | Os04g0502800 | - | Detail |
| C2H4g04819 | 4:21,716,123-21,719,772 | + | C1H4g16599 | CX4g031486 | LOC_Os04g42430 | Os04g0502900 | - | Detail |
| C2H4g05363 | 4:21,722,307-21,723,471 | - | C1H4g04634 | CX4g033315 | LOC_Os04g42451 | Os04g0503200 | - | Detail |
| C2H4g02561 | 4:21,726,938-21,734,388 | - | C1H4g07491 | CX4g032749 | LOC_Os04g42470 | Os04g0503500 | - | Detail |
| C2H4g28080 | 4:21,738,111-21,742,734 | + | C1H4g19134 | CX4g035672 | LOC_Os04g42480 | Os04g0503600 | - | Detail |
| C2H4g16392 | 4:21,741,137-21,747,086 | - | C1H4g08101 | CX4g031420 | LOC_Os04g42490 | Os04g0503700 | - | Detail |
| C2H4g21715 | 4:21,747,800-21,749,408 | + | C1H4g13232 | CX4g031722 | LOC_Os04g42500 | Os04g0503800 | - | Detail |
| C2H4g27111 | 4:21,761,830-21,766,535 | + | C1H4g30274 | CX4g036077 | LOC_Os04g42520 | Os04g0504000 | OsAPT2 | Detail |
| C2H4g06227 | 4:21,769,126-21,769,786 | - | C1H4g12187 | CX4g032902 | LOC_Os04g42540 | Os04g0504200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |