| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g17694 | 5:1,387,037-1,392,794 | - | C2H5g16712 | CX5g039622 | LOC_Os05g03640 | Os05g0127500 | - | Detail |
| C1H5g12303 | 5:1,415,004-1,416,476 | + | C2H5g05001 | CX5g040566 | LOC_Os05g03750 | Os05g0128100 | - | Detail |
| C1H5g14002 | 5:1,429,621-1,431,545 | - | C2H5g10735 | CX5g039214 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| C1H5g27203 | 5:1,437,526-1,440,847 | - | C2H5g15512 | CX5g038112 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| C1H5g26071 | 5:1,450,527-1,454,746 | + | C2H5g12644 | CX5g037779 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| C1H5g17726 | 5:1,457,853-1,459,708 | + | C2H5g20670 | CX5g036800 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| C1H5g20738 | 5:1,460,007-1,462,175 | - | C2H5g08741 | CX5g040768 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| C1H5g14331 | 5:1,494,591-1,500,309 | - | C2H5g24745 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C1H5g16799 | 5:1,506,515-1,508,333 | - | C2H5g23667 | - | - | - | - | Detail |
| C1H5g11198 | 5:1,513,727-1,514,565 | + | C2H5g10940 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C1H5g15292 | 5:1,515,259-1,519,290 | - | C2H5g13765 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C1H5g09306 | 5:1,522,797-1,526,818 | + | C2H5g20349 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C1H5g02682 | 5:1,541,276-1,542,253 | - | C2H5g13879 | - | - | - | - | Detail |
| C1H5g31896 | 5:1,558,184-1,566,344 | - | C2H5g28718 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C1H5g15210 | 5:1,573,177-1,573,586 | - | C2H5g08536 | - | - | Os05g0130500 | - | Detail |
| C1H5g13927 | 5:1,578,202-1,582,694 | - | C2H5g17204 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C1H5g19982 | 5:1,584,559-1,585,021 | + | C2H5g23034 | CX5g038388 | - | - | - | Detail |
| C1H5g21167 | 5:1,586,510-1,587,802 | + | C2H5g10179 | - | - | - | - | Detail |
| C1H5g11003 | 5:1,594,377-1,596,806 | - | C2H5g12456 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C1H5g23202 | 5:1,599,408-1,603,800 | - | C2H5g08847 | - | LOC_Os05g04110 | Os05g0131401 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g09966 | 2:25,729,463-25,730,311 | + | - | CX2g018852 | LOC_Os02g45620 | Os02g0679700 | - | Detail |
| C2H2g12674 | 2:25,737,473-25,743,264 | + | C1H2g29949 | CX2g022671 | LOC_Os02g45650 | Os02g0680400 | - | Detail |
| C2H2g14527 | 2:25,743,487-25,745,859 | + | C1H2g04007 | CX2g022671 | LOC_Os02g58620 | Os02g0167200 | SOP10 | Detail |
| C2H2g14537 | 2:25,746,150-25,747,880 | - | C1H2g12850 | CX2g019518 | LOC_Os02g45660 | Os02g0680600 | OsIspF, IspF | Detail |
| C2H2g30631 | 2:25,749,377-25,753,749 | - | C1H2g12850 | CX2g020440 | LOC_Os02g45670 | Os02g0680700 | - | Detail |
| C2H2g16883 | 2:25,756,299-25,761,857 | + | C1H2g25413 | CX2g024588 | LOC_Os02g45690 | Os02g0681000 | - | Detail |
| C2H2g10372 | 2:25,759,331-25,763,551 | - | C1H2g19356 | CX2g023596 | LOC_Os02g45700 | Os02g0681100 | - | Detail |
| C2H2g21078 | 2:25,767,463-25,768,107 | - | C1H2g25085 | CX2g023190 | LOC_Os02g45710 | Os02g0681200 | - | Detail |
| C2H2g00552 | 2:25,787,829-25,792,097 | + | C1H2g25175 | CX2g023369 | LOC_Os02g45750 | Os02g0681632 | - | Detail |
| C2H2g26537 | 2:25,793,434-25,793,829 | + | - | - | - | - | - | Detail |
| C2H2g07243 | 2:25,801,091-25,802,956 | - | C1H2g09563 | CX2g023685 | LOC_Os02g45760 | Os02g0681900 | - | Detail |
| C2H2g03368 | 2:25,823,251-25,830,448 | + | C1H2g12840 | CX2g021179 | LOC_Os02g45770 | Os02g0682200 | MFO1, OsMADS6, MADS6 | Detail |
| C2H2g06919 | 2:25,834,472-25,834,966 | - | C1H2g25085 | CX2g023274 | LOC_Os02g45780 | Os02g0682300 | DHS | Detail |
| C2H2g26786 | 2:25,844,234-25,845,301 | - | C1H2g27577 | CX2g021503 | LOC_Os02g45810 | Os02g0682500 | OsTTG1 | Detail |
| C2H2g15805 | 2:25,845,990-25,847,809 | - | C1H2g09245 | CX2g020680 | LOC_Os02g45820 | Os02g0682600 | - | Detail |
| C2H2g05663 | 2:25,863,672-25,864,901 | - | C1H2g27536 | CX2g020917 | LOC_Os02g45850 | Os02g0683500 | RAV6 | Detail |
| C2H2g25615 | 2:25,889,425-25,890,054 | - | C1H2g24855 | CX2g022887 | LOC_Os12g01970 | Os02g0225900 | - | Detail |
| C2H2g13029 | 2:25,890,186-25,890,422 | - | C1H2g16441 | CX2g021635 | - | Os02g0225900 | - | Detail |
| C2H2g10983 | 2:25,891,603-25,892,383 | + | C1H2g11065 | CX2g024060 | LOC_Os02g45860 | Os02g0530100 | - | Detail |
| C2H2g09919 | 2:25,894,166-25,897,147 | + | C1H2g05780 | CX2g019047 | LOC_Os02g45870 | Os02g0683900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |