| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g17694 | 5:1,387,037-1,392,794 | - | C2H5g16712 | CX5g039622 | LOC_Os05g03640 | Os05g0127500 | - | Detail |
| C1H5g12303 | 5:1,415,004-1,416,476 | + | C2H5g05001 | CX5g040566 | LOC_Os05g03750 | Os05g0128100 | - | Detail |
| C1H5g14002 | 5:1,429,621-1,431,545 | - | C2H5g10735 | CX5g039214 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| C1H5g27203 | 5:1,437,526-1,440,847 | - | C2H5g15512 | CX5g038112 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| C1H5g26071 | 5:1,450,527-1,454,746 | + | C2H5g12644 | CX5g037779 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| C1H5g17726 | 5:1,457,853-1,459,708 | + | C2H5g20670 | CX5g036800 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| C1H5g20738 | 5:1,460,007-1,462,175 | - | C2H5g08741 | CX5g040768 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| C1H5g14331 | 5:1,494,591-1,500,309 | - | C2H5g24745 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C1H5g16799 | 5:1,506,515-1,508,333 | - | C2H5g23667 | - | - | - | - | Detail |
| C1H5g11198 | 5:1,513,727-1,514,565 | + | C2H5g10940 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C1H5g15292 | 5:1,515,259-1,519,290 | - | C2H5g13765 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C1H5g09306 | 5:1,522,797-1,526,818 | + | C2H5g20349 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C1H5g02682 | 5:1,541,276-1,542,253 | - | C2H5g13879 | - | - | - | - | Detail |
| C1H5g31896 | 5:1,558,184-1,566,344 | - | C2H5g28718 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C1H5g15210 | 5:1,573,177-1,573,586 | - | C2H5g08536 | - | - | Os05g0130500 | - | Detail |
| C1H5g13927 | 5:1,578,202-1,582,694 | - | C2H5g17204 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C1H5g19982 | 5:1,584,559-1,585,021 | + | C2H5g23034 | CX5g038388 | - | - | - | Detail |
| C1H5g21167 | 5:1,586,510-1,587,802 | + | C2H5g10179 | - | - | - | - | Detail |
| C1H5g11003 | 5:1,594,377-1,596,806 | - | C2H5g12456 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C1H5g23202 | 5:1,599,408-1,603,800 | - | C2H5g08847 | - | LOC_Os05g04110 | Os05g0131401 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g29686 | 9:12,283,800-12,285,841 | + | C1H9g14098 | CX9g057499 | - | Os09g0411500 | - | Detail |
| C2H9g24020 | 9:12,289,164-12,291,360 | - | C1H9g15710 | CX9g055887 | LOC_Os09g24530 | Os09g0411650 | - | Detail |
| C2H9g15723 | 9:12,292,714-12,294,723 | - | C1H9g26658 | - | LOC_Os09g24540 | Os09g0411700 | - | Detail |
| C2H9g30013 | 9:12,299,658-12,300,674 | - | C1H9g25817 | CX9g056422 | LOC_Os09g24560 | Os09g0411900 | - | Detail |
| C2H9g02677 | 9:12,305,642-12,309,499 | - | - | - | - | - | - | Detail |
| C2H9g16512 | 9:12,310,817-12,313,589 | - | - | CX9g056752 | - | - | - | Detail |
| C2H9g29693 | 9:12,320,549-12,323,729 | - | C1H9g04539 | CX9g055609 | LOC_Os09g24570 | Os09g0412200 | - | Detail |
| C2H9g24987 | 9:12,357,684-12,358,048 | - | C1H9g24887 | CX9g056335 | LOC_Os09g24590 | Os09g0412400 | - | Detail |
| C2H9g22954 | 9:12,367,829-12,369,247 | + | C1H9g25612 | CX9g056498 | LOC_Os09g24620 | Os09g0412700 | - | Detail |
| C2H9g30609 | 9:12,375,823-12,380,866 | + | C1H9g10917 | CX9g055582 | LOC_Os09g24650 | Os09g0413000 | - | Detail |
| C2H9g23813 | 9:12,381,752-12,384,982 | - | C1H9g25606 | CX9g054861 | LOC_Os09g24660 | Os09g0413100 | - | Detail |
| C2H9g23311 | 9:12,385,034-12,389,010 | + | C1H9g01483 | CX9g055611 | LOC_Os09g24670 | Os09g0413200 | - | Detail |
| C2H9g07064 | 9:12,392,032-12,394,467 | - | C1H9g27670 | CX9g055527 | LOC_Os09g24680 | Os09g0413300 | OsPPR1 | Detail |
| C2H9g21107 | 9:12,395,821-12,397,300 | - | C1H9g13850 | CX9g055730 | LOC_Os09g24690 | Os09g0413500 | - | Detail |
| C2H9g10108 | 9:12,398,905-12,403,516 | - | C1H9g31189 | CX9g055962 | LOC_Os09g24700 | Os09g0413600 | - | Detail |
| C2H9g16912 | 9:12,417,115-12,421,272 | + | C1H9g25839 | CX9g057257 | LOC_Os09g24710 | Os09g0413700 | - | Detail |
| C2H9g05872 | 9:12,444,326-12,444,674 | + | C1H9g16168 | CX9g055576 | LOC_Os09g24800 | Os09g0414300 | Os2R_MYB83 | Detail |
| C2H9g16040 | 9:12,444,717-12,445,469 | + | C1H9g16168 | CX9g055576 | LOC_Os09g24800 | Os09g0414300 | Os2R_MYB83 | Detail |
| C2H9g10070 | 9:12,500,678-12,501,849 | + | C1H9g29440 | CX9g057784 | LOC_Os09g24840 | Os09g0414900 | - | Detail |
| C2H9g21296 | 9:12,501,854-12,502,991 | - | C1H9g27618 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |