| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g17694 | 5:1,387,037-1,392,794 | - | C2H5g16712 | CX5g039622 | LOC_Os05g03640 | Os05g0127500 | - | Detail |
| C1H5g12303 | 5:1,415,004-1,416,476 | + | C2H5g05001 | CX5g040566 | LOC_Os05g03750 | Os05g0128100 | - | Detail |
| C1H5g14002 | 5:1,429,621-1,431,545 | - | C2H5g10735 | CX5g039214 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| C1H5g27203 | 5:1,437,526-1,440,847 | - | C2H5g15512 | CX5g038112 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| C1H5g26071 | 5:1,450,527-1,454,746 | + | C2H5g12644 | CX5g037779 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| C1H5g17726 | 5:1,457,853-1,459,708 | + | C2H5g20670 | CX5g036800 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| C1H5g20738 | 5:1,460,007-1,462,175 | - | C2H5g08741 | CX5g040768 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| C1H5g14331 | 5:1,494,591-1,500,309 | - | C2H5g24745 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C1H5g16799 | 5:1,506,515-1,508,333 | - | C2H5g23667 | - | - | - | - | Detail |
| C1H5g11198 | 5:1,513,727-1,514,565 | + | C2H5g10940 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C1H5g15292 | 5:1,515,259-1,519,290 | - | C2H5g13765 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C1H5g09306 | 5:1,522,797-1,526,818 | + | C2H5g20349 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C1H5g02682 | 5:1,541,276-1,542,253 | - | C2H5g13879 | - | - | - | - | Detail |
| C1H5g31896 | 5:1,558,184-1,566,344 | - | C2H5g28718 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C1H5g15210 | 5:1,573,177-1,573,586 | - | C2H5g08536 | - | - | Os05g0130500 | - | Detail |
| C1H5g13927 | 5:1,578,202-1,582,694 | - | C2H5g17204 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C1H5g19982 | 5:1,584,559-1,585,021 | + | C2H5g23034 | CX5g038388 | - | - | - | Detail |
| C1H5g21167 | 5:1,586,510-1,587,802 | + | C2H5g10179 | - | - | - | - | Detail |
| C1H5g11003 | 5:1,594,377-1,596,806 | - | C2H5g12456 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C1H5g23202 | 5:1,599,408-1,603,800 | - | C2H5g08847 | - | LOC_Os05g04110 | Os05g0131401 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g12140 | 7:21,586,363-21,588,497 | + | C1H7g18777 | CX7g048604 | LOC_Os07g43925 | Os07g0633000 | - | Detail |
| C2H7g19279 | 7:21,588,080-21,592,943 | - | C1H7g18776 | CX7g045989 | LOC_Os07g43940 | Os07g0633100 | - | Detail |
| C2H7g01196 | 7:21,593,910-21,596,442 | + | C1H7g15625 | CX7g049436 | LOC_Os07g43950 | Os07g0633200 | - | Detail |
| C2H7g16598 | 7:21,611,387-21,614,372 | + | C1H7g04691 | CX7g047602 | LOC_Os07g43970 | Os07g0633400 | OsIQM5 | Detail |
| C2H7g19273 | 7:21,615,698-21,619,709 | - | C1H7g26280 | CX7g046486 | LOC_Os07g43980 | Os07g0633500 | OsRH36 | Detail |
| C2H7g03945 | 7:21,624,926-21,625,725 | + | C1H7g05093 | - | - | Os07g0633800 | - | Detail |
| C2H7g26756 | 7:21,631,709-21,633,948 | - | C1H7g21281 | CX7g050101 | LOC_Os07g44020 | Os07g0634000 | - | Detail |
| C2H7g01782 | 7:21,635,043-21,638,338 | - | C1H7g17397 | CX7g048861 | LOC_Os07g44030 | Os07g0634100 | - | Detail |
| C2H7g14350 | 7:21,650,491-21,651,354 | + | C1H7g30273 | CX7g050292 | LOC_Os07g44040 | Os07g0634200 | - | Detail |
| C2H7g04768 | 7:21,653,395-21,654,239 | - | C1H7g10717 | CX7g050133 | LOC_Os07g44050 | Os07g0634300 | - | Detail |
| C2H7g17833 | 7:21,655,324-21,656,735 | - | C1H7g14437 | CX7g049819 | LOC_Os07g44060 | Os07g0634400 | - | Detail |
| C2H7g24236 | 7:21,671,421-21,675,591 | + | C1H7g29370 | CX7g049242 | LOC_Os07g44070 | Os07g0634600 | - | Detail |
| C2H7g14905 | 7:21,686,358-21,688,502 | + | C1H7g19007 | CX7g045999 | LOC_Os07g30130 | Os07g0634900 | - | Detail |
| C2H7g11259 | 7:21,697,540-21,699,243 | + | C1H7g25697 | CX7g046074 | LOC_Os07g44110 | Os07g0635200 | - | Detail |
| C2H7g27547 | 7:21,702,087-21,702,320 | + | C1H7g01610 | CX7g046004 | LOC_Os07g44140 | Os07g0419000 | - | Detail |
| C2H7g26688 | 7:21,705,139-21,706,974 | + | C1H7g29132 | CX7g048214 | LOC_Os07g44130 | Os07g0635300 | - | Detail |
| C2H7g03243 | 7:21,712,771-21,714,449 | + | C1H7g21192 | CX7g046927 | LOC_Os07g44140 | Os07g0635500 | - | Detail |
| C2H7g30551 | 7:21,719,449-21,722,444 | + | C1H7g17502 | CX7g047263 | LOC_Os07g44140 | Os07g0635700 | - | Detail |
| C2H7g09407 | 7:21,722,599-21,724,716 | + | C1H7g18607 | CX7g048404 | LOC_Os07g44170 | Os07g0635800 | - | Detail |
| C2H7g29761 | 7:21,729,008-21,729,304 | + | C1H7g17160 | CX7g047931 | LOC_Os07g44180 | Os07g0635900 | OsLti6a | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |