| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g30581 | 5:1,145,636-1,146,753 | + | C2H5g07168 | CX5g041100 | LOC_Os05g03174 | Os05g0123100 | OsGT43A | Detail |
| C1H5g28081 | 5:1,149,187-1,151,037 | + | C2H5g02369 | CX5g041100 | LOC_Os05g03174 | Os05g0123100 | OsGT43A | Detail |
| C1H5g23427 | 5:1,157,532-1,161,404 | + | C2H5g22807 | CX5g039819 | LOC_Os05g03190 | Os05g0123200 | - | Detail |
| C1H5g08812 | 5:1,161,442-1,164,657 | - | C2H5g07657 | CX5g040457 | LOC_Os05g03200 | Os05g0123300 | - | Detail |
| C1H5g19342 | 5:1,166,632-1,168,138 | - | C2H5g22124 | CX5g036952 | - | Os05g0123400 | - | Detail |
| C1H5g23275 | 5:1,201,430-1,213,376 | - | C2H5g13999 | CX5g038760 | LOC_Os05g03320 | Os05g0124000 | - | Detail |
| C1H5g11486 | 5:1,217,746-1,230,572 | - | C2H5g05422 | CX5g038760 | LOC_Os05g03390 | Os05g0124600 | - | Detail |
| C1H5g22928 | 5:1,235,049-1,238,958 | - | C2H5g29581 | CX5g038403 | LOC_Os05g03410 | Os05g0124800 | - | Detail |
| C1H5g31600 | 5:1,244,997-1,256,747 | + | C2H5g09329 | CX5g041143 | LOC_Os05g03430 | Os05g0125000 | SIZ1, OsSIZ1 | Detail |
| C1H5g24277 | 5:1,281,211-1,283,629 | + | C2H5g18270 | CX5g039053 | LOC_Os05g03460 | Os05g0125300 | - | Detail |
| C1H5g26628 | 5:1,286,440-1,288,603 | + | C2H5g03114 | CX5g037481 | LOC_Os05g03460 | Os05g0125400 | - | Detail |
| C1H5g28044 | 5:1,289,387-1,294,410 | - | C2H5g07081 | CX5g038585 | LOC_Os05g03480 | Os05g0125500 | - | Detail |
| C1H5g08227 | 5:1,315,180-1,317,763 | + | C2H5g25895 | CX5g040791 | LOC_Os05g03530 | Os05g0126100 | OsTET8 | Detail |
| C1H5g16923 | 5:1,319,360-1,321,091 | - | C2H5g27890 | CX5g038217 | LOC_Os05g03540 | Os05g0126200 | - | Detail |
| C1H5g09990 | 5:1,322,709-1,330,614 | - | C2H5g16906 | CX5g037854 | LOC_Os05g03550 | Os05g0126300 | - | Detail |
| C1H5g28656 | 5:1,344,104-1,348,620 | + | C2H5g20873 | - | LOC_Os05g03574 | Os05g0126700 | - | Detail |
| C1H5g11514 | 5:1,350,460-1,351,157 | - | C2H5g04841 | CX5g039859 | LOC_Os05g03590 | Os05g0126800 | - | Detail |
| C1H5g16424 | 5:1,357,956-1,364,704 | + | C2H5g26559 | CX5g040853 | LOC_Os05g03610 | Os05g0127200 | - | Detail |
| C1H5g24918 | 5:1,371,873-1,374,266 | + | C2H5g15340 | CX5g039240 | LOC_Os05g03620 | Os05g0127300 | - | Detail |
| C1H5g22704 | 5:1,378,076-1,381,838 | + | C2H5g02917 | CX5g040335 | LOC_Os05g03630 | Os05g0562300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g09631 | 9:8,006,927-8,008,614 | + | C1H9g27205 | CX9g057160 | LOC_Os09g15790 | Os09g0327100 | - | Detail |
| C2H9g08878 | 9:8,010,192-8,011,081 | - | C1H9g31109 | CX9g055621 | LOC_Os09g15780 | Os09g0327000 | - | Detail |
| C2H9g24688 | 9:8,014,892-8,016,244 | - | C1H9g09285 | CX9g055228 | LOC_Os09g15775 | Os09g0326900 | - | Detail |
| C2H9g12132 | 9:8,016,328-8,018,221 | - | - | - | - | - | - | Detail |
| C2H9g24003 | 9:8,020,742-8,023,525 | - | C1H9g17537 | - | LOC_Os09g15760 | Os09g0326850 | - | Detail |
| C2H9g25380 | 9:8,024,096-8,032,549 | - | C1H9g24231 | CX9g055311 | LOC_Os09g15750 | Os09g0326800 | OsRpn1a | Detail |
| C2H9g13951 | 9:8,049,916-8,053,048 | + | C1H9g01463 | CX9g055191 | LOC_Os09g15700 | Os09g0326100 | - | Detail |
| C2H9g17262 | 9:8,056,980-8,059,451 | + | - | CX9g056621 | - | - | - | Detail |
| C2H9g15972 | 9:8,059,488-8,059,682 | - | - | - | LOC_Os09g15680 | Os09g0325800 | - | Detail |
| C2H9g24883 | 9:8,062,332-8,063,402 | - | C1H9g06365 | CX9g056384 | LOC_Os09g15670 | Os09g0325700 | PP2C1, OsPP2C1, OsSIPP2C1, OsPP2C68, PP2C68, OsPP108 | Detail |
| C2H9g29577 | 9:8,063,432-8,063,764 | + | - | - | - | - | - | Detail |
| C2H9g09634 | 9:8,077,352-8,078,828 | + | C1H9g31373 | CX9g057751 | - | - | - | Detail |
| C2H9g19536 | 9:8,083,013-8,085,577 | + | C1H9g12543 | CX9g057751 | LOC_Os09g14660 | Os09g0325000 | - | Detail |
| C2H9g17279 | 9:8,088,916-8,089,320 | - | - | - | - | - | - | Detail |
| C2H9g14451 | 9:8,095,275-8,096,567 | - | C1H9g22857 | CX9g056577 | LOC_Os09g15560 | Os09g0324400 | - | Detail |
| C2H9g15142 | 9:8,099,495-8,100,904 | - | C1H9g22857 | CX9g056577 | LOC_Os09g15550 | Os09g0324300 | - | Detail |
| C2H9g08875 | 9:8,101,999-8,103,324 | - | C1H9g22857 | CX9g056577 | LOC_Os09g15540 | Os09g0324200 | - | Detail |
| C2H9g12849 | 9:8,105,486-8,105,962 | - | - | CX9g057572 | LOC_Os09g15520 | Os09g0324000 | - | Detail |
| C2H9g30451 | 9:8,113,176-8,114,257 | + | C1H9g26563 | CX9g055980 | LOC_Os09g15510 | Os09g0323700 | - | Detail |
| C2H9g24164 | 9:8,120,999-8,122,070 | - | C1H9g26563 | CX9g057171 | LOC_Os09g15500 | Os09g0323700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |