| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g16783 | 1:21,890,169-21,892,373 | + | C2H1g01711 | CX1g001096 | LOC_Os01g42770 | Os01g0613300 | - | Detail |
| C1H1g19620 | 1:21,892,734-21,894,015 | - | C2H1g08037 | CX1g001646 | LOC_Os01g42780 | Os01g0613500 | - | Detail |
| C1H1g09978 | 1:21,902,707-21,904,441 | - | C2H1g03375 | CX1g001198 | LOC_Os01g42790 | Os01g0613800 | - | Detail |
| C1H1g21693 | 1:21,905,326-21,911,674 | - | C2H1g08375 | CX1g006583 | LOC_Os01g42800 | Os01g0613900 | - | Detail |
| C1H1g30142 | 1:21,913,452-21,917,078 | + | C2H1g30219 | CX1g005988 | LOC_Os01g42810 | Os01g0614300 | - | Detail |
| C1H1g30904 | 1:21,925,022-21,929,373 | + | C2H1g29942 | CX1g001445 | LOC_Os01g42830 | Os01g0614700 | - | Detail |
| C1H1g01885 | 1:21,930,081-21,936,100 | - | C2H1g10991 | CX1g001663 | LOC_Os01g42850 | Os01g0614900 | - | Detail |
| C1H1g14641 | 1:21,939,922-21,940,125 | - | C2H1g28283 | CX1g001822 | LOC_Os01g42860 | Os01g0615050 | OCPI1 | Detail |
| C1H1g14133 | 1:21,945,460-21,947,313 | - | C2H1g18656 | CX1g002212 | LOC_Os01g42870 | Os01g0615200 | - | Detail |
| C1H1g10409 | 1:21,948,182-21,950,802 | - | C2H1g17016 | CX1g004428 | LOC_Os01g42880 | Os01g0615300 | - | Detail |
| C1H1g29477 | 1:21,975,745-21,983,975 | + | C2H1g28413 | CX1g005260 | LOC_Os01g42950 | Os01g0616100 | - | Detail |
| C1H1g00446 | 1:22,008,372-22,012,383 | + | C2H1g04418 | CX1g004354 | LOC_Os01g42960 | Os01g0616333 | - | Detail |
| C1H1g28451 | 1:22,018,941-22,025,508 | - | C2H1g00927 | CX1g002070 | LOC_Os01g42970 | Os01g0616400 | - | Detail |
| C1H1g01886 | 1:22,028,154-22,030,441 | + | C2H1g26183 | CX1g000783 | LOC_Os01g42980 | Os01g0616500 | - | Detail |
| C1H1g19102 | 1:22,031,494-22,034,362 | + | C2H1g13748 | CX1g005608 | LOC_Os01g42990 | Os01g0616600 | - | Detail |
| C1H1g27380 | 1:22,036,013-22,042,387 | - | C2H1g01334 | CX1g005424 | LOC_Os01g43020 | Os01g0616900 | OsCTPS1 | Detail |
| C1H1g02684 | 1:22,071,606-22,085,388 | - | C2H1g12553 | CX1g007195 | LOC_Os01g43030 | Os01g0617500 | - | Detail |
| C1H1g04403 | 1:22,101,331-22,110,077 | + | C2H1g03908 | CX1g002530 | LOC_Os01g43050 | Os01g0617700 | - | Detail |
| C1H1g00516 | 1:22,110,838-22,112,485 | - | C2H1g08569 | CX1g000604 | LOC_Os01g43060 | Os01g0617800 | - | Detail |
| C1H1g09495 | 1:22,114,081-22,116,686 | + | C2H1g01081 | CX1g004316 | LOC_Os01g43070 | Os01g0617900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21608 | 3:27,656,719-27,660,241 | - | C1H3g23470 | CX3g028973 | LOC_Os03g52630 | Os03g0736300 | - | Detail |
| C2H3g15503 | 3:27,664,564-27,668,007 | - | C1H3g16767 | CX3g029628 | LOC_Os03g52640 | Os03g0736400 | - | Detail |
| C2H3g14297 | 3:27,669,405-27,673,074 | + | C1H3g06383 | CX3g026452 | LOC_Os03g52650 | Os03g0736500 | - | Detail |
| C2H3g25472 | 3:27,673,881-27,674,926 | - | C1H3g27583 | CX3g030782 | LOC_Os03g52670 | Os03g0736700 | - | Detail |
| C2H3g06997 | 3:27,690,841-27,694,864 | - | C1H3g22100 | CX3g030023 | LOC_Os03g52690 | Os03g0737000 | - | Detail |
| C2H3g03773 | 3:27,700,068-27,708,325 | - | C1H3g13284 | CX3g030091 | LOC_Os03g52700 | Os03g0737200 | OsHOS1 | Detail |
| C2H3g13435 | 3:27,709,054-27,711,006 | - | C1H3g01016 | CX3g030361 | LOC_Os03g52720 | Os03g0737300 | - | Detail |
| C2H3g06862 | 3:27,713,948-27,715,594 | - | C1H3g28619 | CX3g030361 | LOC_Os03g52730 | Os03g0737400 | - | Detail |
| C2H3g04382 | 3:27,716,139-27,720,319 | + | C1H3g18700 | CX3g025820 | LOC_Os03g52750 | Os03g0737600 | - | Detail |
| C2H3g27223 | 3:27,724,488-27,727,069 | - | C1H3g06923 | CX3g026634 | LOC_Os03g52760 | Os03g0737701 | OsMIK, LPA | Detail |
| C2H3g08831 | 3:27,729,452-27,739,232 | + | C1H3g13520 | CX3g025574 | LOC_Os03g52770 | Os03g0737800 | - | Detail |
| C2H3g00418 | 3:27,739,440-27,742,656 | - | C1H3g22442 | CX3g026366 | LOC_Os03g52780 | Os03g0737900 | - | Detail |
| C2H3g24375 | 3:27,742,829-27,746,487 | + | C1H3g19238 | CX3g026865 | LOC_Os03g52794 | Os03g0738000 | - | Detail |
| C2H3g01060 | 3:27,747,275-27,765,946 | + | C1H3g14512 | CX3g030189 | LOC_Os03g52794 | Os03g0738200 | - | Detail |
| C2H3g05635 | 3:27,767,482-27,772,151 | + | C1H3g21044 | CX3g026362 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| C2H3g05845 | 3:27,783,515-27,787,131 | + | C1H3g07947 | CX3g025013 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| C2H3g02923 | 3:27,794,046-27,796,994 | + | C1H3g24267 | CX3g030893 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| C2H3g01404 | 3:27,805,911-27,807,678 | + | C1H3g14490 | CX3g028113 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| C2H3g15580 | 3:27,837,312-27,841,357 | + | C1H3g22532 | CX3g026120 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| C2H3g17064 | 3:27,842,274-27,846,884 | + | C1H3g30167 | CX3g027471 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |