| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g00412 | 1:1,205,291-1,207,738 | + | C2H1g24576 | CX1g003465 | LOC_Os01g03660 | Os01g0127400 | - | Detail |
| C1H1g25838 | 1:1,209,203-1,209,889 | + | C2H1g17865 | CX1g002042 | LOC_Os01g03720 | Os01g0127450 | - | Detail |
| C1H1g17663 | 1:1,210,419-1,211,515 | + | C2H1g02319 | CX1g005179 | LOC_Os01g03670 | Os01g0127500 | OsTKPR2 | Detail |
| C1H1g24827 | 1:1,215,246-1,217,557 | + | C2H1g03781 | CX1g006285 | LOC_Os01g02760 | Os01g0127700 | - | Detail |
| C1H1g05668 | 1:1,217,661-1,218,315 | + | C2H1g03781 | CX1g006285 | LOC_Os01g03690 | Os01g0117400 | - | Detail |
| C1H1g08835 | 1:1,225,922-1,230,986 | + | C2H1g13836 | CX1g004218 | LOC_Os01g03710 | Os01g0127900 | - | Detail |
| C1H1g25654 | 1:1,241,292-1,242,522 | - | C2H1g25959 | CX1g002896 | LOC_Os01g03720 | Os01g0128000 | MYB1, Os2R_MYB1 | Detail |
| C1H1g31764 | 1:1,254,615-1,256,427 | - | C2H1g01385 | CX1g004405 | LOC_Os01g03740 | Os01g0128100 | - | Detail |
| C1H1g04042 | 1:1,257,095-1,260,002 | + | C2H1g18960 | CX1g004550 | LOC_Os01g03730 | Os01g0128200 | - | Detail |
| C1H1g30874 | 1:1,260,240-1,261,552 | - | C2H1g15883 | CX1g002239 | LOC_Os01g03750 | Os01g0128300 | MHZ4 | Detail |
| C1H1g07436 | 1:1,262,139-1,267,477 | - | C2H1g19347 | CX1g006333 | LOC_Os01g03760 | Os01g0128400 | - | Detail |
| C1H1g20521 | 1:1,272,265-1,280,309 | + | C2H1g18545 | CX1g003056 | LOC_Os01g03820 | Os01g0128800 | - | Detail |
| C1H1g27481 | 1:1,292,873-1,294,279 | + | C2H1g10390 | CX1g002103 | LOC_Os01g03840 | Os01g0129200 | SL1, sl1(t), sl1, stl1, opb, OPB1, ps, PS, OPB | Detail |
| C1H1g30507 | 1:1,306,551-1,309,571 | - | C2H1g17049 | CX1g003490 | LOC_Os01g03870 | Os01g0129500 | - | Detail |
| C1H1g11492 | 1:1,322,229-1,323,238 | + | C2H1g13371 | CX1g006241 | LOC_Os01g03890 | Os01g0129600 | - | Detail |
| C1H1g30416 | 1:1,349,867-1,352,853 | - | C2H1g29639 | CX1g005809 | LOC_Os01g03914 | Os01g0130000 | - | Detail |
| C1H1g04895 | 1:1,357,467-1,357,897 | - | C2H1g15465 | - | LOC_Os01g03914 | - | - | Detail |
| C1H1g15284 | 1:1,383,194-1,387,792 | + | C2H1g02978 | CX1g003798 | LOC_Os01g03950 | Os01g0130400 | - | Detail |
| C1H1g17044 | 1:1,417,733-1,418,275 | + | C2H1g14763 | - | - | - | - | Detail |
| C1H1g07180 | 1:1,419,589-1,420,156 | + | C2H1g14763 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g17645 | 8:18,213,296-18,214,387 | - | C1H8g30791 | CX8g052157 | LOC_Os08g34010 | Os08g0438400 | - | Detail |
| C2H8g28655 | 8:18,219,931-18,222,805 | + | C1H8g11351 | CX8g053479 | LOC_Os08g34020 | Os08g0438600 | - | Detail |
| C2H8g07806 | 8:18,223,489-18,223,764 | - | - | CX8g051646 | LOC_Os08g34030 | Os08g0438701 | - | Detail |
| C2H8g24168 | 8:18,227,001-18,228,150 | + | C1H8g11640 | CX8g052614 | - | - | - | Detail |
| C2H8g15837 | 8:18,228,486-18,231,776 | - | C1H8g14901 | CX8g050689 | LOC_Os08g34050 | Os08g0439000 | - | Detail |
| C2H8g10777 | 8:18,231,864-18,237,795 | - | C1H8g14901 | CX8g050689 | LOC_Os08g34050 | Os08g0439000 | - | Detail |
| C2H8g23364 | 8:18,242,576-18,257,708 | + | C1H8g11931 | CX8g052852 | LOC_Os08g34060 | Os08g0439100 | - | Detail |
| C2H8g25672 | 8:18,258,910-18,262,990 | + | C1H8g20273 | CX8g053025 | LOC_Os08g34070 | Os08g0439150 | - | Detail |
| C2H8g18075 | 8:18,267,061-18,267,943 | + | C1H8g21547 | - | - | - | - | Detail |
| C2H8g27178 | 8:18,273,191-18,274,414 | + | C1H9g23281 | CX8g051823 | LOC_Os08g34120 | Os08g0439600 | - | Detail |
| C2H8g21313 | 8:18,277,580-18,279,021 | + | C1H8g26690 | CX8g052245 | LOC_Os08g34130 | Os08g0439900 | - | Detail |
| C2H8g04622 | 8:18,280,174-18,283,102 | - | C1H8g06058 | CX8g053193 | LOC_Os08g34140 | Os08g0440000 | - | Detail |
| C2H8g01359 | 8:18,285,839-18,286,450 | + | C1H8g24760 | CX8g051094 | LOC_Os08g34150 | Os08g0440100 | - | Detail |
| C2H8g07704 | 8:18,289,657-18,295,748 | + | C1H8g09641 | CX8g054498 | LOC_Os08g34160 | Os08g0440200 | - | Detail |
| C2H8g01898 | 8:18,297,580-18,298,452 | + | C1H9g27565 | CX8g053893 | LOC_Os08g34170 | Os08g0440300 | - | Detail |
| C2H8g12751 | 8:18,310,628-18,313,244 | - | C1H8g21727 | CX8g054137 | LOC_Os08g34190 | Os08g0440500 | OsSDF2-2 | Detail |
| C2H8g02220 | 8:18,322,524-18,327,668 | + | C1H8g02297 | CX8g052265 | LOC_Os08g34210 | Os08g0440800 | - | Detail |
| C2H8g17963 | 8:18,328,256-18,332,636 | - | C1H8g11295 | CX8g050759 | LOC_Os08g34220 | Os08g0440900 | - | Detail |
| C2H8g22904 | 8:18,338,125-18,339,474 | + | C1H8g08760 | CX8g051987 | LOC_Os08g34240 | Os08g0441100 | - | Detail |
| C2H8g01722 | 8:18,347,038-18,347,238 | + | C1H8g15866 | CX8g053950 | LOC_Os08g34258 | Os08g0441200 | OsPI8-1a | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |