| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g00412 | 1:1,205,291-1,207,738 | + | C2H1g24576 | CX1g003465 | LOC_Os01g03660 | Os01g0127400 | - | Detail |
| C1H1g25838 | 1:1,209,203-1,209,889 | + | C2H1g17865 | CX1g002042 | LOC_Os01g03720 | Os01g0127450 | - | Detail |
| C1H1g17663 | 1:1,210,419-1,211,515 | + | C2H1g02319 | CX1g005179 | LOC_Os01g03670 | Os01g0127500 | OsTKPR2 | Detail |
| C1H1g24827 | 1:1,215,246-1,217,557 | + | C2H1g03781 | CX1g006285 | LOC_Os01g02760 | Os01g0127700 | - | Detail |
| C1H1g05668 | 1:1,217,661-1,218,315 | + | C2H1g03781 | CX1g006285 | LOC_Os01g03690 | Os01g0117400 | - | Detail |
| C1H1g08835 | 1:1,225,922-1,230,986 | + | C2H1g13836 | CX1g004218 | LOC_Os01g03710 | Os01g0127900 | - | Detail |
| C1H1g25654 | 1:1,241,292-1,242,522 | - | C2H1g25959 | CX1g002896 | LOC_Os01g03720 | Os01g0128000 | MYB1, Os2R_MYB1 | Detail |
| C1H1g31764 | 1:1,254,615-1,256,427 | - | C2H1g01385 | CX1g004405 | LOC_Os01g03740 | Os01g0128100 | - | Detail |
| C1H1g04042 | 1:1,257,095-1,260,002 | + | C2H1g18960 | CX1g004550 | LOC_Os01g03730 | Os01g0128200 | - | Detail |
| C1H1g30874 | 1:1,260,240-1,261,552 | - | C2H1g15883 | CX1g002239 | LOC_Os01g03750 | Os01g0128300 | MHZ4 | Detail |
| C1H1g07436 | 1:1,262,139-1,267,477 | - | C2H1g19347 | CX1g006333 | LOC_Os01g03760 | Os01g0128400 | - | Detail |
| C1H1g20521 | 1:1,272,265-1,280,309 | + | C2H1g18545 | CX1g003056 | LOC_Os01g03820 | Os01g0128800 | - | Detail |
| C1H1g27481 | 1:1,292,873-1,294,279 | + | C2H1g10390 | CX1g002103 | LOC_Os01g03840 | Os01g0129200 | SL1, sl1(t), sl1, stl1, opb, OPB1, ps, PS, OPB | Detail |
| C1H1g30507 | 1:1,306,551-1,309,571 | - | C2H1g17049 | CX1g003490 | LOC_Os01g03870 | Os01g0129500 | - | Detail |
| C1H1g11492 | 1:1,322,229-1,323,238 | + | C2H1g13371 | CX1g006241 | LOC_Os01g03890 | Os01g0129600 | - | Detail |
| C1H1g30416 | 1:1,349,867-1,352,853 | - | C2H1g29639 | CX1g005809 | LOC_Os01g03914 | Os01g0130000 | - | Detail |
| C1H1g04895 | 1:1,357,467-1,357,897 | - | C2H1g15465 | - | LOC_Os01g03914 | - | - | Detail |
| C1H1g15284 | 1:1,383,194-1,387,792 | + | C2H1g02978 | CX1g003798 | LOC_Os01g03950 | Os01g0130400 | - | Detail |
| C1H1g17044 | 1:1,417,733-1,418,275 | + | C2H1g14763 | - | - | - | - | Detail |
| C1H1g07180 | 1:1,419,589-1,420,156 | + | C2H1g14763 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g00379 | 7:6,323,884-6,327,447 | - | C1H7g27988 | CX7g048858 | LOC_Os07g12630 | Os07g0229700 | - | Detail |
| C2H7g06660 | 7:6,329,748-6,330,205 | - | C1H7g24986 | CX7g047347 | LOC_Os07g12640 | - | - | Detail |
| C2H7g04906 | 7:6,330,297-6,331,961 | - | C1H7g24986 | CX7g047347 | LOC_Os07g12640 | Os07g0229800 | - | Detail |
| C2H7g00782 | 7:6,332,818-6,334,374 | - | C1H7g01149 | CX7g050341 | LOC_Os07g05580 | Os07g0229900 | - | Detail |
| C2H7g28410 | 7:6,336,530-6,338,232 | - | C1H7g24016 | CX7g047891 | LOC_Os07g12710 | Os07g0230500 | - | Detail |
| C2H7g17771 | 7:6,342,996-6,347,190 | + | - | CX7g046619 | LOC_Os12g19430 | - | - | Detail |
| C2H7g00199 | 7:6,354,525-6,356,299 | + | - | CX7g047216 | LOC_Os12g14930 | - | - | Detail |
| C2H7g11080 | 7:6,385,319-6,385,726 | + | - | CX7g047236 | LOC_Os07g12720 | Os07g0230600 | - | Detail |
| C2H7g22553 | 7:6,388,086-6,390,154 | - | C1H7g13957 | CX7g048372 | LOC_Os07g12730 | Os07g0230700 | - | Detail |
| C2H7g12068 | 7:6,405,413-6,407,908 | - | C1H7g06206 | CX7g048469 | LOC_Os07g12730 | Os07g0230700 | - | Detail |
| C2H7g07498 | 7:6,410,610-6,411,943 | - | C1H7g01657 | CX7g048178 | LOC_Os07g12730 | Os07g0230700 | - | Detail |
| C2H7g25161 | 7:6,416,575-6,417,123 | - | - | - | - | - | - | Detail |
| C2H7g27371 | 7:6,417,824-6,418,275 | - | - | - | - | - | - | Detail |
| C2H7g26762 | 7:6,420,752-6,423,063 | + | C1H7g03693 | CX7g049891 | LOC_Os07g12770 | Os07g0231400 | - | Detail |
| C2H7g12739 | 7:6,423,954-6,426,554 | + | C1H7g18530 | CX7g047049 | LOC_Os07g12780 | Os07g0231500 | - | Detail |
| C2H7g07401 | 7:6,427,746-6,428,495 | + | - | CX7g047049 | LOC_Os07g12780 | Os07g0231500 | - | Detail |
| C2H7g21143 | 7:6,431,988-6,432,353 | + | - | CX7g047048 | LOC_Os07g12790 | Os07g0231700 | - | Detail |
| C2H7g02381 | 7:6,436,545-6,438,106 | + | C1H7g08963 | CX7g049201 | LOC_Os07g12800 | Os07g0231800 | - | Detail |
| C2H7g12874 | 7:6,442,720-6,448,345 | - | C1H7g02116 | CX7g048910 | LOC_Os07g12810 | Os07g0231900 | - | Detail |
| C2H7g30315 | 7:6,456,829-6,457,648 | - | C1H7g06867 | CX7g049933 | LOC_Os07g12820 | Os07g0232100 | OsREM20 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |