| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g05932 | 5:924,833-928,799 | - | C2H5g20475 | CX5g039871 | LOC_Os05g02820 | Os05g0119700 | - | Detail |
| C1H5g25594 | 5:943,281-945,395 | - | C2H5g27318 | CX5g040974 | LOC_Os05g02880 | Os05g0120100 | - | Detail |
| C1H5g31585 | 5:977,467-982,443 | + | C2H5g09848 | CX5g037865 | LOC_Os05g02940 | Os05g0120700 | - | Detail |
| C1H5g20255 | 5:985,138-986,734 | + | C2H5g03610 | CX5g040092 | LOC_Os05g02970 | Os05g0120800 | - | Detail |
| C1H5g25679 | 5:997,164-998,437 | + | C2H5g24004 | CX5g038448 | LOC_Os05g02990 | Os05g0121000 | - | Detail |
| C1H5g01702 | 5:1,001,069-1,008,762 | + | C2H5g03745 | CX5g038251 | - | Os05g0121100 | - | Detail |
| C1H5g21915 | 5:1,012,216-1,016,443 | - | C2H5g13518 | CX5g038381 | LOC_Os05g03000 | Os05g0121200 | - | Detail |
| C1H5g23502 | 5:1,017,735-1,022,979 | + | C2H5g27724 | CX5g037956 | LOC_Os05g03020 | Os05g0121400 | - | Detail |
| C1H5g18884 | 5:1,030,945-1,035,254 | - | C2H5g29033 | CX5g038220 | LOC_Os05g03040 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C1H5g22491 | 5:1,060,140-1,064,909 | - | C2H5g03539 | CX5g039481 | LOC_Os05g03050 | Os05g0121700 | - | Detail |
| C1H5g25689 | 5:1,071,694-1,075,687 | + | C2H5g07687 | CX5g038840 | LOC_Os05g03060 | Os05g0121800 | - | Detail |
| C1H5g18041 | 5:1,075,746-1,077,506 | - | C2H5g05750 | CX5g041093 | LOC_Os05g03070 | Os05g0121900 | - | Detail |
| C1H5g13312 | 5:1,086,909-1,095,059 | + | C2H5g19920 | CX5g040056 | LOC_Os05g03100 | Os05g0122400 | - | Detail |
| C1H5g19743 | 5:1,095,083-1,096,561 | - | C2H5g29150 | CX5g040504 | LOC_Os05g03110 | Os05g0122500 | - | Detail |
| C1H5g02473 | 5:1,104,967-1,108,773 | + | C2H5g04039 | CX5g037677 | LOC_Os05g03120 | Os05g0122600 | - | Detail |
| C1H5g18506 | 5:1,109,543-1,109,884 | - | C2H5g14986 | CX3g026690 | LOC_Os05g03130 | Os05g0122700 | - | Detail |
| C1H5g28175 | 5:1,120,308-1,124,274 | + | C2H5g02194 | CX5g039466 | LOC_Os05g03140 | Os05g0122800 | - | Detail |
| C1H5g12318 | 5:1,125,348-1,127,698 | - | C2H5g07267 | CX5g037843 | LOC_Os05g03150 | Os05g0122900 | OsBLE1 | Detail |
| C1H5g28350 | 5:1,132,427-1,132,855 | - | C2H5g27198 | CX5g040830 | LOC_Os05g03160 | Os05g0123000 | - | Detail |
| C1H5g07212 | 5:1,132,902-1,133,171 | - | C2H5g14651 | CX5g040717 | LOC_Os05g07270 | Os05g0417000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g13211 | 8:21,447,034-21,448,143 | - | C1H8g31232 | CX8g054182 | LOC_Os08g39980 | Os08g0510700 | - | Detail |
| C2H8g07448 | 8:21,448,505-21,449,838 | - | C1H8g31232 | CX8g054182 | LOC_Os08g39980 | Os08g0510700 | - | Detail |
| C2H8g25749 | 8:21,452,577-21,453,716 | - | C1H9g12273 | CX8g050917 | LOC_Os08g39990 | Os08g0510800 | - | Detail |
| C2H8g04181 | 8:21,458,968-21,461,660 | + | C1H8g04920 | CX8g052027 | LOC_Os08g40010 | Os08g0510900 | - | Detail |
| C2H8g25618 | 8:21,462,672-21,464,210 | + | C1H8g29844 | CX8g051467 | LOC_Os08g40020 | Os08g0511000 | - | Detail |
| C2H8g09758 | 8:21,469,305-21,471,218 | - | C1H8g08233 | CX8g051129 | LOC_Os08g40030 | Os08g0511200 | OsCUC3 | Detail |
| C2H8g05688 | 8:21,481,365-21,481,889 | - | - | - | LOC_Os08g40060 | Os08g0511400 | - | Detail |
| C2H8g00208 | 8:21,485,693-21,486,067 | - | - | CX9g055236 | LOC_Os08g40080 | Os08g0511600 | - | Detail |
| C2H8g22517 | 8:21,489,438-21,491,523 | - | C1H8g05784 | CX8g054013 | LOC_Os08g40090 | Os08g0511700 | OsIRL4, pi55-1, pi55(t) | Detail |
| C2H8g28624 | 8:21,504,166-21,505,877 | - | C1H8g17789 | CX9g056061 | LOC_Os08g40100 | Os08g0511800 | - | Detail |
| C2H8g22216 | 8:21,507,099-21,510,970 | - | C1H8g17303 | CX8g054792 | LOC_Os08g40110 | Os08g0511900 | - | Detail |
| C2H8g01912 | 8:21,519,134-21,522,061 | + | C1H8g13566 | CX8g051208 | LOC_Os08g40120 | Os08g0512100 | - | Detail |
| C2H8g13020 | 8:21,523,792-21,524,916 | + | C1H8g25106 | CX8g053994 | LOC_Os08g40130 | Os08g0512200 | - | Detail |
| C2H8g21906 | 8:21,525,670-21,529,138 | + | C1H8g00693 | CX8g053394 | LOC_Os08g40140 | Os08g0512300 | - | Detail |
| C2H8g05099 | 8:21,529,454-21,533,802 | - | C1H8g20441 | CX8g053561 | LOC_Os08g40150 | Os08g0512400 | OsAHL16 | Detail |
| C2H8g28028 | 8:21,540,038-21,542,494 | + | C1H8g06615 | CX8g050659 | LOC_Os08g40160 | Os08g0512500 | - | Detail |
| C2H8g01482 | 8:21,543,826-21,545,433 | + | C1H8g24588 | CX8g050792 | LOC_Os08g40170 | Os08g0512600 | CDKB2;1, Orysa;CDKB2;1, OsCDKB2;1, cdc2Os3, Orysa;CDKB;2 | Detail |
| C2H8g01373 | 8:21,550,733-21,555,287 | + | C1H8g03467 | CX8g051014 | LOC_Os08g40180 | Os08g0512700 | - | Detail |
| C2H8g25544 | 8:21,558,129-21,559,746 | + | C1H8g18158 | - | LOC_Os08g40190 | Os08g0512900 | - | Detail |
| C2H8g24125 | 8:21,561,966-21,565,722 | + | C1H8g01845 | CX8g054165 | LOC_Os08g40200 | Os08g0513000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |