| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g20274 | 5:758,868-760,789 | + | C2H5g29361 | CX5g041152 | LOC_Os05g02460 | Os05g0115500 | - | Detail |
| C1H5g01075 | 5:762,339-763,317 | + | C2H5g02188 | CX5g040271 | LOC_Os05g02480 | Os05g0115600 | - | Detail |
| C1H5g06606 | 5:765,634-770,032 | + | C2H5g28025 | CX5g038640 | LOC_Os05g02490 | Os05g0115700 | - | Detail |
| C1H5g00700 | 5:772,499-774,814 | - | C2H5g08553 | CX5g038268 | LOC_Os05g02500 | Os05g0115800 | - | Detail |
| C1H5g21718 | 5:777,606-783,687 | - | C2H5g03564 | CX5g039461 | LOC_Os05g02510 | Os05g0115900 | - | Detail |
| C1H5g14722 | 5:786,866-790,086 | - | C2H5g29421 | CX5g037633 | LOC_Os05g02520 | Os05g0116000 | - | Detail |
| C1H5g00316 | 5:791,080-794,628 | - | C2H5g24397 | CX5g037620 | LOC_Os05g02530 | Os05g0116100 | OsDHAR | Detail |
| C1H5g27987 | 5:812,457-816,643 | + | C2H5g06610 | CX5g038728 | LOC_Os05g02580 | Os05g0116700 | - | Detail |
| C1H5g05174 | 5:823,852-824,559 | + | C2H5g21068 | CX5g037324 | LOC_Os05g02620 | Os05g0117000 | - | Detail |
| C1H5g12811 | 5:826,646-827,236 | + | C2H5g30499 | CX5g036973 | LOC_Os05g02630 | Os05g0117300 | - | Detail |
| C1H5g09619 | 5:829,681-833,242 | + | C2H5g02284 | CX5g040817 | LOC_Os05g02640 | Os05g0117500 | - | Detail |
| C1H5g10788 | 5:833,931-841,439 | + | C2H5g29091 | CX5g037847 | LOC_Os05g02650 | Os05g0117600 | - | Detail |
| C1H5g21607 | 5:848,541-855,152 | + | C2H5g25076 | CX5g040345 | LOC_Os05g02670 | Os05g0117798 | - | Detail |
| C1H5g13581 | 5:856,610-860,416 | - | C2H5g23113 | CX5g036699 | LOC_Os05g02680 | Os05g0117864 | - | Detail |
| C1H5g04400 | 5:879,191-880,118 | + | C2H5g23844 | CX5g039032 | LOC_Os05g02730 | Os05g0118700 | LSY1, OsWOX3 | Detail |
| C1H5g07583 | 5:909,067-909,827 | - | C2H5g07908 | CX5g037492 | LOC_Os05g02770 | Os05g0119200 | OsGPRP3 | Detail |
| C1H5g14848 | 5:911,881-914,028 | - | C2H5g12083 | CX5g036862 | LOC_Os05g02780 | - | - | Detail |
| C1H5g27829 | 5:914,591-919,050 | + | C2H5g19310 | - | - | Os05g0119350 | - | Detail |
| C1H5g12144 | 5:915,225-919,418 | - | C2H5g27633 | CX5g038855 | LOC_Os05g02790 | Os05g0119400 | - | Detail |
| C1H5g31502 | 5:921,562-923,469 | + | C2H5g28586 | CX5g039714 | LOC_Os05g02810 | Os05g0119600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g29234 | 3:9,589,591-9,592,789 | + | C1H3g09918 | CX3g029447 | LOC_Os03g19300 | Os03g0305700 | - | Detail |
| C2H3g25404 | 3:9,593,061-9,594,512 | - | C1H3g15276 | CX3g025751 | LOC_Os03g19310 | Os03g0305800 | - | Detail |
| C2H3g04492 | 3:9,605,909-9,607,258 | + | C1H3g04998 | CX3g029664 | LOC_Os03g19330 | Os03g0306100 | - | Detail |
| C2H3g27650 | 3:9,608,099-9,625,295 | - | C1H3g22410 | CX3g028723 | LOC_Os03g19340 | Os03g0306200 | - | Detail |
| C2H3g07435 | 3:9,627,515-9,639,295 | - | C1H3g02755 | CX3g027549 | LOC_Os03g19350 | Os03g0306400 | - | Detail |
| C2H3g20582 | 3:9,647,619-9,648,140 | + | C1H3g18574 | CX3g026074 | LOC_Os03g19375 | Os03g0239400 | - | Detail |
| C2H3g07871 | 3:9,651,461-9,651,847 | + | C1H3g08148 | CX3g027392 | LOC_Os03g19380 | Os03g0306800 | - | Detail |
| C2H3g26352 | 3:9,652,500-9,654,378 | - | C1H3g23949 | CX3g025960 | LOC_Os03g19390 | Os03g0306900 | - | Detail |
| C2H3g08753 | 3:9,654,788-9,656,681 | + | C1H3g18672 | CX3g025770 | LOC_Os03g19400 | Os03g0307000 | - | Detail |
| C2H3g28158 | 3:9,658,647-9,666,875 | + | C1H3g26919 | CX3g025641 | LOC_Os03g19410 | Os03g0307100 | - | Detail |
| C2H3g27859 | 3:9,667,653-9,668,684 | + | C1H3g07326 | CX3g028955 | LOC_Os03g19427 | Os03g0307300 | - | Detail |
| C2H3g23633 | 3:9,672,964-9,675,855 | - | C1H3g08713 | CX3g027893 | LOC_Os03g19420 | Os03g0307200 | NAS2, OsNAS2 | Detail |
| C2H3g12347 | 3:9,680,537-9,681,031 | + | C1H3g12875 | CX3g027748 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| C2H3g00214 | 3:9,683,277-9,684,485 | + | C1H3g10945 | CX3g025182 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| C2H3g27228 | 3:9,684,900-9,688,173 | + | C1H3g01117 | CX3g028724 | LOC_Os03g19462 | - | - | Detail |
| C2H3g27622 | 3:9,690,908-9,693,250 | + | C1H3g07984 | CX3g026010 | LOC_Os03g19470 | Os03g0307700 | - | Detail |
| C2H3g03655 | 3:9,693,645-9,700,852 | - | C1H3g00240 | CX3g031316 | LOC_Os03g19480 | Os03g0307800 | IEZ1, OsiEZ1, OsSET1, SET1, iEZ1, OsEZ1/OsiEZ1, OsEZ1, EZ1, ez1, OsSET15, SDG718 | Detail |
| C2H3g06844 | 3:9,702,422-9,702,951 | + | C1H3g04726 | CX3g025615 | LOC_Os03g13830 | Os03g0307900 | - | Detail |
| C2H3g23976 | 3:9,704,003-9,706,653 | + | C1H3g19730 | CX3g024948 | LOC_Os03g19500 | Os03g0308000 | SMG3 | Detail |
| C2H3g08220 | 3:9,708,308-9,710,749 | - | C1H3g14154 | CX3g029346 | LOC_Os03g19510 | Os03g0308100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |