| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g20274 | 5:758,868-760,789 | + | C2H5g29361 | CX5g041152 | LOC_Os05g02460 | Os05g0115500 | - | Detail |
| C1H5g01075 | 5:762,339-763,317 | + | C2H5g02188 | CX5g040271 | LOC_Os05g02480 | Os05g0115600 | - | Detail |
| C1H5g06606 | 5:765,634-770,032 | + | C2H5g28025 | CX5g038640 | LOC_Os05g02490 | Os05g0115700 | - | Detail |
| C1H5g00700 | 5:772,499-774,814 | - | C2H5g08553 | CX5g038268 | LOC_Os05g02500 | Os05g0115800 | - | Detail |
| C1H5g21718 | 5:777,606-783,687 | - | C2H5g03564 | CX5g039461 | LOC_Os05g02510 | Os05g0115900 | - | Detail |
| C1H5g14722 | 5:786,866-790,086 | - | C2H5g29421 | CX5g037633 | LOC_Os05g02520 | Os05g0116000 | - | Detail |
| C1H5g00316 | 5:791,080-794,628 | - | C2H5g24397 | CX5g037620 | LOC_Os05g02530 | Os05g0116100 | OsDHAR | Detail |
| C1H5g27987 | 5:812,457-816,643 | + | C2H5g06610 | CX5g038728 | LOC_Os05g02580 | Os05g0116700 | - | Detail |
| C1H5g05174 | 5:823,852-824,559 | + | C2H5g21068 | CX5g037324 | LOC_Os05g02620 | Os05g0117000 | - | Detail |
| C1H5g12811 | 5:826,646-827,236 | + | C2H5g30499 | CX5g036973 | LOC_Os05g02630 | Os05g0117300 | - | Detail |
| C1H5g09619 | 5:829,681-833,242 | + | C2H5g02284 | CX5g040817 | LOC_Os05g02640 | Os05g0117500 | - | Detail |
| C1H5g10788 | 5:833,931-841,439 | + | C2H5g29091 | CX5g037847 | LOC_Os05g02650 | Os05g0117600 | - | Detail |
| C1H5g21607 | 5:848,541-855,152 | + | C2H5g25076 | CX5g040345 | LOC_Os05g02670 | Os05g0117798 | - | Detail |
| C1H5g13581 | 5:856,610-860,416 | - | C2H5g23113 | CX5g036699 | LOC_Os05g02680 | Os05g0117864 | - | Detail |
| C1H5g04400 | 5:879,191-880,118 | + | C2H5g23844 | CX5g039032 | LOC_Os05g02730 | Os05g0118700 | LSY1, OsWOX3 | Detail |
| C1H5g07583 | 5:909,067-909,827 | - | C2H5g07908 | CX5g037492 | LOC_Os05g02770 | Os05g0119200 | OsGPRP3 | Detail |
| C1H5g14848 | 5:911,881-914,028 | - | C2H5g12083 | CX5g036862 | LOC_Os05g02780 | - | - | Detail |
| C1H5g27829 | 5:914,591-919,050 | + | C2H5g19310 | - | - | Os05g0119350 | - | Detail |
| C1H5g12144 | 5:915,225-919,418 | - | C2H5g27633 | CX5g038855 | LOC_Os05g02790 | Os05g0119400 | - | Detail |
| C1H5g31502 | 5:921,562-923,469 | + | C2H5g28586 | CX5g039714 | LOC_Os05g02810 | Os05g0119600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g15807 | 2:5,046,468-5,051,199 | + | C1H2g10529 | CX2g019345 | LOC_Os02g10510 | Os02g0198600 | - | Detail |
| C2H2g25569 | 2:5,052,010-5,058,918 | - | C1H2g05539 | CX2g023458 | LOC_Os02g10520 | Os02g0198700 | - | Detail |
| C2H2g18783 | 2:5,072,117-5,073,751 | - | C1H2g08158 | CX2g022114 | LOC_Os02g10540 | Os02g0198900 | - | Detail |
| C2H2g11987 | 2:5,088,073-5,089,026 | - | C1H2g24423 | CX2g023351 | LOC_Os02g10590 | Os02g0199300 | - | Detail |
| C2H2g02789 | 2:5,093,736-5,096,612 | + | C1H2g30492 | CX2g022696 | LOC_Os02g10600 | Os02g0199500 | - | Detail |
| C2H2g20503 | 2:5,097,184-5,098,473 | - | C1H2g18635 | CX2g024334 | - | Os02g0199600 | - | Detail |
| C2H2g05452 | 2:5,104,599-5,110,437 | - | C1H2g14720 | CX2g019312 | LOC_Os02g10630 | Os02g0199800 | - | Detail |
| C2H2g30668 | 2:5,113,316-5,118,771 | - | C1H2g22079 | CX2g022777 | LOC_Os02g10640 | Os02g0199900 | - | Detail |
| C2H2g20119 | 2:5,123,316-5,128,196 | + | C1H2g00290 | CX2g019933 | LOC_Os02g10650 | Os02g0200000 | OsSec14-7 | Detail |
| C2H2g08800 | 2:5,130,998-5,133,053 | - | C1H2g01509 | CX2g020248 | LOC_Os02g10660 | Os02g0200300 | - | Detail |
| C2H2g20788 | 2:5,137,722-5,141,639 | + | C1H2g22046 | CX2g024181 | LOC_Os02g10690 | Os02g0200800 | - | Detail |
| C2H2g24738 | 2:5,142,524-5,145,851 | - | C1H2g10608 | CX2g023893 | LOC_Os02g10700 | Os02g0200900 | - | Detail |
| C2H2g10447 | 2:5,155,962-5,157,179 | - | C1H2g13038 | CX2g018996 | LOC_Os02g10710 | Os02g0758000 | - | Detail |
| C2H2g27059 | 2:5,157,812-5,161,199 | - | C1H2g25618 | CX2g021219 | LOC_Os02g10720 | Os02g0201000 | - | Detail |
| C2H2g02539 | 2:5,185,476-5,186,006 | - | C1H2g23514 | CX2g019330 | LOC_Os02g10730 | Os02g0201300 | - | Detail |
| C2H2g22913 | 2:5,201,611-5,204,821 | - | C1H2g23712 | CX2g020008 | LOC_Os02g10740 | Os02g0201500 | - | Detail |
| C2H2g21450 | 2:5,220,163-5,220,890 | + | C1H2g24067 | CX2g021409 | LOC_Os02g10760 | Os02g0202000 | ERF3, Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12 | Detail |
| C2H2g30620 | 2:5,225,622-5,228,362 | - | C1H2g20496 | CX2g019796 | LOC_Os02g10770 | Os02g0201900 | - | Detail |
| C2H2g13782 | 2:5,235,698-5,238,079 | + | C1H2g04540 | CX2g022152 | LOC_Os02g10780 | Os02g0202200 | OsSPX2, SPX2 | Detail |
| C2H2g29179 | 2:5,239,700-5,268,576 | - | C1H2g00291 | CX2g020057 | LOC_Os02g10794 | Os02g0202300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |