| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02042 | 5:513,174-516,476 | - | C2H5g09162 | CX5g040304 | LOC_Os05g02020 | Os05g0110900 | OsRLCK176 | Detail |
| C1H5g01174 | 5:527,812-532,085 | + | C2H5g11635 | CX5g040039 | LOC_Os05g02040 | Os05g0111000 | - | Detail |
| C1H5g27315 | 5:533,666-534,136 | - | C2H5g26966 | CX5g040400 | LOC_Os05g02050 | Os05g0111100 | - | Detail |
| C1H5g07435 | 5:534,700-537,533 | + | C2H5g17334 | CX5g040392 | LOC_Os05g02060 | Os05g0111200 | - | Detail |
| C1H5g27084 | 5:540,628-541,519 | + | C2H5g12916 | CX5g040053 | LOC_Os05g02070 | Os05g0111300 | - | Detail |
| C1H5g26371 | 5:548,145-550,952 | + | C2H5g05513 | CX5g037799 | LOC_Os05g02110 | Os05g0111800 | - | Detail |
| C1H5g14373 | 5:552,295-555,886 | + | C2H5g11886 | CX5g039103 | LOC_Os05g02120 | Os05g0111900 | - | Detail |
| C1H5g08090 | 5:558,852-562,338 | - | C2H5g23338 | CX5g041069 | LOC_Os05g02130 | Os05g0112000 | - | Detail |
| C1H5g31844 | 5:576,569-578,006 | - | C2H5g29799 | CX5g037905 | LOC_Os05g02150 | Os05g0112200 | - | Detail |
| C1H5g01426 | 5:643,691-646,463 | + | C2H5g20673 | CX5g037208 | LOC_Os05g02220 | Os05g0113000 | - | Detail |
| C1H5g04501 | 5:649,007-649,603 | + | C2H5g15332 | CX5g037013 | LOC_Os05g02230 | Os05g0113100 | - | Detail |
| C1H5g29837 | 5:653,712-657,773 | + | C2H5g14815 | CX5g040836 | LOC_Os05g02240 | Os05g0113300 | - | Detail |
| C1H5g28066 | 5:658,185-660,018 | + | C2H5g11556 | CX5g039600 | LOC_Os04g46910 | Os05g0113400 | - | Detail |
| C1H5g16120 | 5:660,552-663,275 | - | C2H5g27685 | CX5g038887 | LOC_Os05g02260 | Os05g0113500 | - | Detail |
| C1H5g07930 | 5:667,764-668,314 | + | C2H5g18885 | CX5g040016 | LOC_Os05g02300 | Os05g0113900 | - | Detail |
| C1H5g26468 | 5:668,898-672,223 | - | C2H5g17163 | CX5g040876 | LOC_Os05g02310 | Os05g0114000 | - | Detail |
| C1H5g17375 | 5:677,497-682,865 | - | C2H5g13720 | CX5g036913 | LOC_Os05g02350 | Os05g0114100 | - | Detail |
| C1H5g23973 | 5:713,708-715,509 | - | C2H5g06700 | CX5g037402 | LOC_Os05g02400 | Os05g0114500 | - | Detail |
| C1H5g22800 | 5:715,727-717,877 | + | C2H5g20678 | CX5g036932 | LOC_Os05g02410 | Os05g0114600 | - | Detail |
| C1H5g06200 | 5:753,169-754,902 | + | C2H5g10830 | CX5g037573 | LOC_Os05g02450 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g28226 | 4:25,141,928-25,144,517 | - | C1H4g09996 | - | LOC_Os04g49130 | Os04g0580400 | OsSCE3 | Detail |
| C2H4g09701 | 4:25,148,467-25,149,423 | - | - | CX4g035401 | LOC_Os04g49140 | Os04g0580500 | - | Detail |
| C2H4g28180 | 4:25,157,517-25,163,020 | + | C1H4g28417 | CX4g036099 | LOC_Os04g49150 | Os04g0580700 | MADS17, OsMADS17, NMADS3, RMADS213, nmads3 | Detail |
| C2H4g29841 | 4:25,165,360-25,165,848 | - | C1H4g23703 | CX4g031640 | LOC_Os04g49160 | Os04g0580800 | OsRFPH2-6 | Detail |
| C2H4g24583 | 4:25,170,519-25,171,040 | - | - | CX4g034669 | LOC_Os04g49170 | Os04g0580866 | - | Detail |
| C2H4g04279 | 4:25,172,890-25,175,528 | - | C1H8g13175 | CX4g033382 | LOC_Os06g36530 | - | - | Detail |
| C2H4g16797 | 4:25,186,392-25,187,121 | + | C1H4g30271 | CX4g035989 | LOC_Os04g49194 | Os04g0581000 | OsSAH2 | Detail |
| C2H4g02021 | 4:25,191,095-25,192,198 | + | C1H4g21644 | CX4g035989 | LOC_Os04g49194 | Os04g0581000 | OsSAH2 | Detail |
| C2H4g17595 | 4:25,193,950-25,195,360 | - | C1H4g27247 | CX4g034941 | LOC_Os04g49210 | Os04g0581100 | OsSAH3 | Detail |
| C2H4g22618 | 4:25,205,221-25,207,845 | - | C1H4g19809 | CX4g034701 | LOC_Os04g49220 | Os04g0581300 | - | Detail |
| C2H4g25213 | 4:25,221,044-25,222,318 | - | C1H4g15146 | CX4g035204 | LOC_Os04g49230 | Os04g0581400 | RAVL1 | Detail |
| C2H4g07246 | 4:25,264,468-25,264,665 | + | - | CX4g034172 | - | Os04g0581700 | - | Detail |
| C2H4g27357 | 4:25,266,514-25,267,024 | - | C1H4g26375 | CX4g036477 | LOC_Os04g49260 | Os04g0581800 | - | Detail |
| C2H4g21103 | 4:25,268,952-25,273,054 | - | C1H4g04071 | CX4g033493 | LOC_Os04g49270 | Os04g0582000 | OsDNA2_12 | Detail |
| C2H4g08363 | 4:25,274,439-25,278,081 | - | C1H4g14184 | CX4g033493 | LOC_Os04g49310 | Os04g0582600 | OsDNA2_13 | Detail |
| C2H4g08829 | 4:25,279,421-25,279,981 | - | C1H4g14184 | CX4g033493 | - | - | - | Detail |
| C2H4g18439 | 4:25,281,550-25,287,064 | - | C1H4g22667 | CX4g036138 | LOC_Os04g49320 | Os04g0582700 | OsDNA2_10 | Detail |
| C2H4g11122 | 4:25,288,555-25,288,861 | - | C1H4g13543 | CX4g033723 | LOC_Os04g49340 | Os04g0582900 | OsDNA2_11 | Detail |
| C2H4g27939 | 4:25,288,930-25,290,634 | - | C1H4g13543 | CX4g036138 | LOC_Os04g49340 | Os04g0582900 | OsDNA2_11 | Detail |
| C2H4g27086 | 4:25,293,122-25,293,784 | - | C1H4g24238 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |